Pairwise Alignments

Query, 528 a.a., aminobenzoyl-glutamate transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  402 bits (1032), Expect = e-116
 Identities = 224/511 (43%), Positives = 325/511 (63%), Gaps = 18/511 (3%)

Query: 19  RFLDGVEYLGNLLPHPITLFAIFCVVLLVASGIAGYFELSVVDPRPEGAKGRAADGMIHV 78
           RFL+ VE LGN LP P  LFAIF  ++ + S        + +DPR            I V
Sbjct: 12  RFLNTVETLGNKLPDPAVLFAIFLGLVWLISWWLSGVSFAEIDPR--------TGNPIKV 63

Query: 79  VSLLNADGLELIVTNLVKNFVGFAPLGTVLVAMLGVAIAEHSGLLSAAMRGLVMGASKRM 138
           V++L    L    + LV  FV F PLG VLVAMLG+ +AEH+G ++A +R ++    K +
Sbjct: 64  VNMLEGGALTAFTSTLVSTFVTFPPLGVVLVAMLGLGVAEHTGFINAGLRSILSVTPKML 123

Query: 139 VTFTVVFAGIISNTASELGYVVLIPLAAMLFHSLGRHPLAGLAAAFAGVSGGYSANLLI- 197
           +T  ++  GI+S+ A + GYV++IPL A++F++ GRHPLAG+AAAFAGVSGG+SA + + 
Sbjct: 124 LTPVLIAVGILSHVAVDAGYVLVIPLGAVIFYAAGRHPLAGIAAAFAGVSGGFSATVGVP 183

Query: 198 GTVDPLLSGITETAARM-IDP---TYSVGPEVNWYFMAASTFVIAILGAFVTEKIVEPKL 253
            ++DP+L+G+T+ AAR+  DP   T ++ P  N +F +AS  +I ++G F+T+K++EP+L
Sbjct: 184 SSLDPMLAGLTQAAARLSADPAAATLTINPLNNIFFTSASAILIILVGWFITDKVIEPRL 243

Query: 254 GKYDVSEASDDLSQDKMGSLTALEKKALAYAGLAVVVVSALLAWTIVPADGVLRGEDG-L 312
            K  V+   D  +   +  L   E++ L +A L++++    L  T    +   RGEDG L
Sbjct: 244 KKTAVN--GDPATLPTLDELQPNERRGLRFAMLSMLLCVLGLVLTAYGDNSAWRGEDGGL 301

Query: 313 VSGS-PFLKSIVAFIFIFFAIPGYVYGRVVGTMKTDRDVINAMAKSMSSMGMYIVLVFFA 371
            S S P ++SIVA IF+FF IPG VYG V GT    R +I  M+KSMS MG YIV+ FF 
Sbjct: 302 TSASAPLMRSIVAIIFVFFLIPGIVYGYVAGTANNHRAIIQGMSKSMSGMGYYIVMAFFC 361

Query: 372 AQFVAFFSWTKFGQVLAVLGADFLKDIGLTGPMLFFAFILMCGYINLMIGSASAQWAVTA 431
           AQF+  F  +  G ++A+ GA  LK++ L   +     I +   +NL++GSASA+WA+  
Sbjct: 362 AQFIYAFGQSNLGALMAIKGALALKELALPLSVTLVGIIFLTALVNLLVGSASAKWALIG 421

Query: 432 PIFVPMLMLVGYAPEVIQAAYRIGDSVTNIITPMMSYFGLILAVATRYMKNLGIGTLIAT 491
            I VPMLM +G +P++ QAAYR+GDS TNIITP+M YF LI+    +Y+K  GIGTLIA 
Sbjct: 422 AIMVPMLMELGVSPDLTQAAYRVGDSSTNIITPLMPYFPLIVVFCQKYVKESGIGTLIAL 481

Query: 492 MLPYSVVFMVGWSLLFYVWVFVLGLPVGPGA 522
           MLP+S+ F++ WS    V+ + LGLP+G G+
Sbjct: 482 MLPFSISFLLLWSAFLLVY-WALGLPLGIGS 511