Pairwise Alignments

Query, 571 a.a., proline--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., Prolyl-tRNA synthetase (EC 6.1.1.15), bacterial type from Xanthomonas campestris pv. campestris strain 8004

 Score =  595 bits (1534), Expect = e-174
 Identities = 309/552 (55%), Positives = 390/552 (70%), Gaps = 10/552 (1%)

Query: 1   MRTSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60
           MR S + L T KETP DAE+VSH+LMLRAGMIRKLASGLYTW P GLRVLRKVE IVR+E
Sbjct: 1   MRLSQFHLHTTKETPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVREE 60

Query: 61  IDNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRN 120
           ++ AGA+E L P +QP ELW+ TGR EK G +LL+  DR E+ F  +PTAEE      R 
Sbjct: 61  MNRAGAVEVLFPTIQPRELWDATGRWEKFGGQLLKIKDRKEQEFCYTPTAEEAAAEFARQ 120

Query: 121 EVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVA 180
           E++SYKQLPLN YQIQTKFRDE RPRFGVMRAREF M DAYSF +  A + + Y+ M  A
Sbjct: 121 EINSYKQLPLNFYQIQTKFRDEIRPRFGVMRAREFLMKDAYSFHLTDADMAREYDNMRAA 180

Query: 181 YCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTESDYAANIEKAEAVA 240
           Y + F R+GL++R V AD+GAIGG+ S EFHV+AESGED +AFST SDYAAN+E A A  
Sbjct: 181 YIRIFTRLGLEFRAVQADSGAIGGDASQEFHVIAESGEDSLAFSTGSDYAANVETASAAL 240

Query: 241 PAIERPAPTQAMTLVDTPNAKTIAELVEQHGLPIEKTVKTLFVKASDEIDAPIVALIIRG 300
           PA  RPA  + +  VDTP  KT  ++ +  GLP+++TVK++ V  +    A  V +++RG
Sbjct: 241 PA-PRPAAGETLQRVDTPTQKTCEDVAQLLGLPLQRTVKSIAVMTT----AGFVLVLVRG 295

Query: 301 DHELNEIKAEKLAEVASPLEMASEEEIRALIGAGPGSLGPVGLKLP--FIVDRTVAVMND 358
           DH +NE+K  K+A +A    +A+E EIR  +G+ PG LGPV    P   I DR VA M D
Sbjct: 296 DHAVNELKLAKVAGMAD-YRLANESEIRQHLGSEPGFLGPVQPAQPIRIIADRDVAAMAD 354

Query: 359 FGAGANIDGKHYFGINWGRDV-ELGKVEDLRNVVEGDPSPCGKGTLMLKRGIEVGHIFQL 417
           F  GAN  G H  G+NWGRD+ E   V D+RNVV+GD +  G G L L RGIEVGH+FQL
Sbjct: 355 FVVGANAVGVHLTGVNWGRDLPEPETVADVRNVVDGDRASDG-GELRLTRGIEVGHVFQL 413

Query: 418 GTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNHDDYGIIWPDAIAPFQVA 477
           G+ Y+E +   VLD NGK  +++MGCYGIG+SR+VAAAIEQNHDD GI+WP  +AP++V 
Sbjct: 414 GSKYAEALQATVLDENGKAAVMKMGCYGIGISRIVAAAIEQNHDDAGIVWPAPMAPWKVV 473

Query: 478 IVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELIGVPHTIIIGDR 537
           +  +N  +  +V  AA  L  EL AAGI+   DDR  RPG MF+DMEL+GVPH +++ +R
Sbjct: 474 VCVINPKQDAQVAAAAGDLLEELIAAGIDAALDDRGLRPGAMFADMELLGVPHRVVVSER 533

Query: 538 SMDEGHFEYKNR 549
            +  G FEY+ R
Sbjct: 534 GLAAGTFEYRAR 545