Pairwise Alignments

Query, 571 a.a., proline--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 600 a.a., prolyl-tRNA synthetase from Synechococcus elongatus PCC 7942

 Score =  444 bits (1142), Expect = e-129
 Identities = 270/599 (45%), Positives = 351/599 (58%), Gaps = 31/599 (5%)

Query: 1   MRTSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQE 60
           MR S  L  TL+E P +AE+ SHKL+LRAG IR++ASG+Y +LP   RVLRKV  IVR+E
Sbjct: 1   MRLSQMLFVTLREDPAEAEIPSHKLLLRAGYIRRIASGIYAYLPLMWRVLRKVSQIVREE 60

Query: 61  IDNAGAIETLMPVVQPFELWEETGRSE---KMGPELLRFTDRHERPFVLSPTAEEVITAL 117
           +D  GA ETL+P +QP ELW+E+GR E   K    +    DR +R   L PT EEVITA+
Sbjct: 61  MDATGAQETLLPQLQPAELWQESGRWETYTKAEGIMFSLDDRQQRQLGLGPTHEEVITAV 120

Query: 118 VRNEVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAM 177
            R+ + SY+QLP NLYQIQTKFRDE RPRFG+MR REF M DAYSF  D+  L ++Y AM
Sbjct: 121 ARDLIRSYRQLPQNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEESLRQTYAAM 180

Query: 178 HVAYCKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTESDYAANIEKAE 237
             AY   F R GL +R V AD+GAIGG+ S EF +LA++GED I ++ +  YAAN+EKA 
Sbjct: 181 DQAYRNIFRRCGLQFRAVEADSGAIGGSASQEFMILADAGEDEILYTEDGRYAANVEKAV 240

Query: 238 AVAPAIERPAPTQAMTLVDTPNAKTIAELVE-QHGLPIEKTVKTLFVKASDEIDAPIVAL 296
           ++ PA    +        +TP   TIA L E     P +   + L+    D      + +
Sbjct: 241 SL-PAEAIASAFTTFEKRETPGTDTIASLCEFLKADPTQVVKQVLYQAVFDNGKLLPILI 299

Query: 297 IIRGDHELNEIK---------AEKLAEVASPLEMASEEEIRALIGA--GPGSLGP----- 340
            IRGD  +NEIK         A+  A+    L +   E ++    A    G LGP     
Sbjct: 300 SIRGDQSVNEIKLTNELTRRAADYGAKTVIALTVPDAEALKKWTAAPLPLGYLGPDLADS 359

Query: 341 -------VGLKLPFIVDRTVAVMNDFGAGANIDGKHYFGINWGRDVELGKVEDLRNVVEG 393
                  +  K   +VD T A + +F  GAN    H  G NW  +     V DLR  + G
Sbjct: 360 AIAVNESIIPKFLRLVDPTAAELQNFVTGANEVNFHVVGANWETNFPKPAVVDLRTALVG 419

Query: 394 DPSPCGKGTLMLK-RGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVV 452
           D +      ++   RGIE GHIFQLG  YS+ M       NG    L MGCYGIGVSRV 
Sbjct: 420 DRAQHDSSQVLASARGIEAGHIFQLGLKYSQAMGATFTTENGTEEPLWMGCYGIGVSRVA 479

Query: 453 AAAIEQNHDDYGIIWPDAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDR 512
            AA+EQ++D  GIIWP AIAP+Q  +V  N+  +E+V  AAEK+YA+LTAAGIE L DDR
Sbjct: 480 QAAVEQSYDKDGIIWPVAIAPYQAVVVIPNITDTEQV-AAAEKIYADLTAAGIETLLDDR 538

Query: 513 KERPGVMFSDMELIGVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMESIIDFIQAKLA 571
            ER GV F D +LIG+P+ I+ G RS+ EG  E   R   E   +A+ S+++ +Q  +A
Sbjct: 539 DERAGVKFKDADLIGIPYRIVTG-RSLKEGKVEVVQRASKESSVIAVGSVVETVQDWIA 596