Pairwise Alignments

Query, 571 a.a., proline--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., Probable prolyl-tRNA synthetase ProS (proline--tRNA ligase) (PRORS) (global RNA synthesis factor) (proline translase) from Mycobacterium tuberculosis H37Rv

 Score =  401 bits (1030), Expect = e-116
 Identities = 237/581 (40%), Positives = 329/581 (56%), Gaps = 20/581 (3%)

Query: 2   RTSNYLLSTLKETPNDAEVVSHKLMLRAGMIRKLASGLYTWLPTGLRVLRKVENIVRQEI 61
           R S   L TL++ P DAEV SHKL++RAG IR +A GLY+WLP GLRVLR +E ++R E+
Sbjct: 4   RMSELFLRTLRDDPADAEVASHKLLIRAGYIRPVAPGLYSWLPLGLRVLRNIERVIRDEM 63

Query: 62  DNAGAIETLMPVVQPFELWEETGRSEKMGPELLRFTDRHERPFVLSPTAEEVITALVRNE 121
           +  G  E L P + P   +E T R  + G  + R  DR    ++L PT EE+ T  V+ E
Sbjct: 64  NAIGGQEILFPALLPRAPYETTNRWTQYGDSVFRLKDRRGNDYLLGPTHEELFTLTVKGE 123

Query: 122 VSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDAYSFDIDKAGLEKSYEAMHVAY 181
            SSYK  PL LYQIQTK+RDE RPR G++RAREF M D+YSFDID AGL+ +Y A   AY
Sbjct: 124 YSSYKDFPLTLYQIQTKYRDEARPRAGILRAREFVMKDSYSFDIDAAGLKAAYHAHREAY 183

Query: 182 CKAFDRMGLDYRPVLADTGAIGGNGSHEFHVLAESGEDLIAFSTESDYAANIEKAEAVAP 241
            + FDR+ + Y  V A +GA+GG+ S EF   + SGED      ES YAAN+E      P
Sbjct: 184 QRIFDRLQVRYVIVSAVSGAMGGSASEEFLAESPSGEDAFVRCLESGYAANVEAVVTARP 243

Query: 242 AIERPAPTQAMTLVDTPNAKTIAELVE-------QHGLPIEKTVKTLFVKASDE-IDAPI 293
                       + DT +  TIA LV           +    T+K + +K      D  +
Sbjct: 244 DTLPIDGLPEAVVHDTGDTPTIASLVAWANEADLGRTVTAADTLKNVLIKVRQPGGDTEL 303

Query: 294 VALIIRGDHELNEIKAEKLAEVASPLEMA--SEEEIRALIGAGPGSLGPVGLK---LPFI 348
           +A+ + GD E+++   ++L     P + A   +++         G +GP  L+   + ++
Sbjct: 304 LAIGVPGDREVDD---KRLGAALEPADYALLDDDDFAKHPFLVKGYIGPKALRENNVRYL 360

Query: 349 VDRTVAVMNDFGAGANIDGKHYFGINWGRDVELGKVEDLRNVVEGDPSPCGKGTLMLKRG 408
           VD  +     +  GA+  G+H  G+  GRD       +   V EGDPSP G G L++ RG
Sbjct: 361 VDPRIVDGTSWITGADQPGRHVVGLVAGRDFTADGTIEAAEVREGDPSPDGAGPLVMARG 420

Query: 409 IEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNHDDYGIIWP 468
           IE+GHIFQLG+ Y++     VL  +GK V L MG YGIGVSR+VA   EQ+HD+ G+ WP
Sbjct: 421 IEIGHIFQLGSKYTDAFTADVLGEDGKPVRLTMGSYGIGVSRLVAVVAEQHHDELGLRWP 480

Query: 469 DAIAPFQVAIVPMNMHKSERVQQAAEKLYAELTAAGIEVLFDDRKERPGVMFSDMELIGV 528
             +APF V +V  N  K  + +  A  L A+L   G+EVL DDR+  PGV F D EL+G+
Sbjct: 481 STVAPFDVHLVIAN--KDAQARAGATALAADLDRLGVEVLLDDRQASPGVKFKDAELLGM 538

Query: 529 PHTIIIGDRSMDEGHFEYKNRRQGE-KEAVAMESIIDFIQA 568
           P  +++G R   +G  E ++R  G+ +E VA  S+   I A
Sbjct: 539 PWIVVVG-RGWADGVVELRDRFSGQTRELVAGASLATDIAA 578