Pairwise Alignments

Query, 571 a.a., proline--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 497 a.a., prolyl-tRNA synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 82.0 bits (201), Expect = 5e-20
 Identities = 50/167 (29%), Positives = 88/167 (52%), Gaps = 4/167 (2%)

Query: 407 RGIEVGHIFQLGTNYSEKMNCGVLDSNGKNVILEMGCYGIGVSRVVAAAIEQNHDDYGII 466
           + ++ G    LG N+++  +   ++   K   +    +G+  +R++ A I  + DD G++
Sbjct: 237 KALQSGTSHFLGQNFAKAFDVQFVNKENKMEYVWATSWGVS-TRLMGALIMTHSDDNGLV 295

Query: 467 WPDAIAPFQVAIVPM--NMHKSERVQQAAEKLYAELTAAGIEVLFDDR-KERPGVMFSDM 523
            P  +AP QV IVP+  N  + +++    E + A+L A GI V +D+   +RPG  F+D 
Sbjct: 296 LPPHLAPIQVVIVPIYKNDEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPGFKFADY 355

Query: 524 ELIGVPHTIIIGDRSMDEGHFEYKNRRQGEKEAVAMESIIDFIQAKL 570
           EL GVP  +++G R ++    E   R   EKE V  + I  ++Q  L
Sbjct: 356 ELKGVPVRLVMGGRDLENNTMEVMRRDTLEKETVTCDGIETYVQKLL 402



 Score = 35.4 bits (80), Expect = 5e-06
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 101 ERPFVLSPTAEEVITALVRNEVSSYKQLPLNLYQIQTKFRDERRPRFGVMRAREFCMMDA 160
           E   ++ PT+E +I    +N + SY+ LP+   Q    FR E R R   +R  EF   + 
Sbjct: 118 EEELIIRPTSETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRL-FLRTAEFLWQEG 176

Query: 161 YS 162
           ++
Sbjct: 177 HT 178