Pairwise Alignments

Query, 214 a.a., DUF533 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., putative membrane protein from Pseudomonas fluorescens FW300-N2E2

 Score =  173 bits (438), Expect = 3e-48
 Identities = 101/236 (42%), Positives = 140/236 (59%), Gaps = 30/236 (12%)

Query: 1   MDLKSLLNQALSSDLVKKGSEQLKNL-----GQDKSQLGAL--------------GAGAL 41
           M+ + LL+Q     L+K G E L+N      G+    LG L              G GAL
Sbjct: 1   MNTRGLLDQ-----LLKSGQEMLQNKAGGSQGKSSGGLGGLLGGSGNLGGMLSGAGGGAL 55

Query: 42  GGGLLGMLLGSKKSAKWGKSALKVGGAAALGALAYKVYNDWNAKQNG--QSAPTPFDESN 99
             G +G+LLG+KK+  +G  AL  GG AALG +AYK Y +W A+Q    +S P   D   
Sbjct: 56  AAGAMGLLLGNKKARSFGGKALAYGGLAALGVIAYKAYGNWQAQQGTAPRSEPQTLDRVP 115

Query: 100 P----RHELIILKAMIAAAKADGHVDEQEMARIQQAIEELGADNQVQQLVEQELRKPLDP 155
           P    +H   ILKA++AAAKADGHVDE+E   I+    +L  D ++Q  +  EL KPLDP
Sbjct: 116 PAQVEQHSQAILKALVAAAKADGHVDERERQLIEGEFTKLDNDQELQHWLHAELNKPLDP 175

Query: 156 SEIARFAQNPAQASELYLASLLIADEQNFMEKAYLNELAKQLGLDDQLVAQLNLQV 211
           +++AR A  P  A+E+Y+AS+++ DE+NFMEK+YL+ELA+QL L+  L  +L  QV
Sbjct: 176 TDVARAASTPEMAAEMYIASVMLVDEENFMEKSYLDELARQLKLEPGLKVELEKQV 231