Pairwise Alignments

Query, 214 a.a., DUF533 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., putative membrane protein from Pseudomonas fluorescens FW300-N1B4

 Score =  172 bits (435), Expect = 6e-48
 Identities = 104/235 (44%), Positives = 141/235 (60%), Gaps = 24/235 (10%)

Query: 1   MDLKSLLNQALSS--DLV--KKGSEQLKNL--------------GQDKSQLGALGAGALG 42
           M+ + LL+Q L S  DL+  K G  Q K+               G   S L   G GAL 
Sbjct: 1   MNTRGLLDQLLKSGQDLLHNKAGGTQNKSAAGGLGGLLGGNGGAGGLGSLLSGAGGGALA 60

Query: 43  GGLLGMLLGSKKSAKWGKSALKVGGAAALGALAYKVYNDWNAKQNG--QSAPTPFDE--- 97
            G +G+LLGSKK+   G  AL  GG AALG +AYK Y +W A+Q    ++ P   D    
Sbjct: 61  AGAMGLLLGSKKARSVGGKALTYGGLAALGVIAYKAYGNWQAQQGTTPKTEPQTLDRVPA 120

Query: 98  -SNPRHELIILKAMIAAAKADGHVDEQEMARIQQAIEELGADNQVQQLVEQELRKPLDPS 156
               +H   ILKA++AAAKADGHVDE+E A I+    +L  D ++QQ +  EL KPLDP+
Sbjct: 121 AQVEQHSQAILKALVAAAKADGHVDERERALIEGEFTKLDNDQELQQWLHAELNKPLDPT 180

Query: 157 EIARFAQNPAQASELYLASLLIADEQNFMEKAYLNELAKQLGLDDQLVAQLNLQV 211
           ++AR A  P  A+E+Y+AS+++ DE+NFMEK+YL+ELA+QL L+  L A+L  QV
Sbjct: 181 DVARAASTPEMAAEMYIASVMLVDEENFMEKSYLDELARQLKLEPGLKAELEKQV 235