Pairwise Alignments

Query, 145 a.a., IS200/IS605 family transposase IS1004 from Vibrio cholerae E7946 ATCC 55056

Subject, 139 a.a., IS200/IS605 family transposase from Erwinia tracheiphila HP pepo 2.2

 Score =  159 bits (401), Expect = 2e-44
 Identities = 75/139 (53%), Positives = 103/139 (74%), Gaps = 5/139 (3%)

Query: 1   MGDYRSSSHVYWRCKYHIVWTPKFRFKILKGNVAKELNRSIYILCNMKDCEVLELNVQPD 60
           M  ++ +SHV+W C+YHIVWTP++RF+IL+ NV  ++     I       EV+ELN Q D
Sbjct: 1   MSRFQKASHVFWCCQYHIVWTPRYRFRILRNNVGGQIR----ISGEQPGIEVVELNDQTD 56

Query: 61  HVHLVAIIPPKVSISTLMGVLKGRSAIRLFNKFPHIRK-KLWGNHFWARGYFVDTVGVNE 119
           HVHL   +PP++SIS + G LKG++A+RLF+KFP +RK K WGN FWARGY VDTVG NE
Sbjct: 57  HVHLRVKVPPRLSISHVTGDLKGKTALRLFSKFPCLRKNKQWGNDFWARGYCVDTVGTNE 116

Query: 120 EIIRRYVRHQDKKELEQEQ 138
           E+I +YV++Q+K E+E+ Q
Sbjct: 117 EMIIKYVKYQEKHEVEESQ 135