Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., Transglycosylase, Slt family from Pseudomonas fluorescens FW300-N2E2

 Score =  328 bits (840), Expect = 3e-94
 Identities = 181/456 (39%), Positives = 277/456 (60%), Gaps = 18/456 (3%)

Query: 43  VLRVGTLNNPLSYYIGPDGPTGLDYELAREFAKELGVKLEMKPAYRLSSLFPAL--KNGE 100
           VLRV T N+P +Y+   +G TG +YEL + FA +LGV+L+++ A  L  LF  +   NG 
Sbjct: 1   VLRVVTRNSPATYFEDRNGETGFEYELVKRFADDLGVELKIETADNLDDLFSQIGKPNGP 60

Query: 101 VDIIAAGLSQSEERLKDFRAGPAYYYVSQQVVYKKGDWRPRSFKQLVERQQTLLKDNPEL 160
           V + AAGL  SE+R K  R   +Y  V+ Q++Y+ G  RP     L  ++  +LK +   
Sbjct: 61  V-LAAAGLVSSEQRKKQVRFSRSYLEVTPQIIYRNGQSRPTDAAALAGKKIMVLKGS--- 116

Query: 161 AFFSVVDDSHFEHTLLAKQQKYPDFQFHVDSNSDVNDLLKKVSQGELLFTMADSVEVSLS 220
                   +H E     KQQ YP  ++      +V DLL+ V +G++  T+ DS EV+++
Sbjct: 117 --------THAEQLAQLKQQ-YPGIEYEESDAVEVVDLLRMVDEGQIDLTLVDSNEVAMN 167

Query: 221 QRIYPELAAAFELTEDQPISWFIRRSDDESLYALMIEFFGNLKQSGYLASLEEKYIGHIG 280
           Q  +P +  AF+L + +  SW +   +D SL   +  +   ++++G L  L+++Y GH+ 
Sbjct: 168 QVYFPNVRVAFDLGDARSQSWAVAPGEDNSLLNEINSYLDKVQKNGTLQRLKDRYYGHVD 227

Query: 281 AFDYVDTRAFIRALDTRLPRWTPLFQKYSAE--FDWRLVAALAYQESHWNPYAKSPTGVR 338
              Y+    F + L  RLP++   F+ Y+ +   DWRL+AA+ YQES W P   S TGVR
Sbjct: 228 VLGYMGATTFAQHLQQRLPKYEQHFKTYAKKEKVDWRLLAAIGYQESLWQPAVTSKTGVR 287

Query: 339 GLMMLTLPTARSVGVSDRLDPEQSIRGGVEYLRRMMERVPDSISEHEKIWFALASYNIGY 398
           GLMMLT  TA+++GVS+RLDP+QSI GG +YL  M +++ +SI E ++ WFALA+YN+G 
Sbjct: 288 GLMMLTQNTAQAMGVSNRLDPKQSIMGGAKYLAYMKDQLDESIQEPDRTWFALAAYNVGS 347

Query: 399 GHMMDARRLTKSQGADPDSWADVKDRLPQLQQKKYFTQTRYGYARGDEARNYVENIRRYY 458
           GH+ DAR+L   +G +P+ W DVK  LP+L QK+++++TRYGYARG E  ++V NIRRYY
Sbjct: 348 GHLDDARKLAAKEGLNPNKWLDVKKILPRLSQKQWYSKTRYGYARGGEPVHFVANIRRYY 407

Query: 459 QSIIGHLEQRQLATGDESIEDLTVIALDEEFFNEEA 494
             I+  + Q QL     +  +L V  +D+   N+E+
Sbjct: 408 -DILTWVTQPQLEGNQVAEGNLHVPGVDKSKPNQES 442