Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., Transglycosylase, Slt family from Pseudomonas fluorescens FW300-N2E2

 Score = 99.0 bits (245), Expect = 3e-25
 Identities = 122/465 (26%), Positives = 198/465 (42%), Gaps = 54/465 (11%)

Query: 34  ELEKIRERGVLRVGTLNNPLSYYIGPDGPTGLDYELAREFAKELG--------VKLEMKP 85
           +L +IR   VL+V    +  S       P G++Y   R F + L         + L++ P
Sbjct: 38  DLAQIRSSRVLKVLVNQSRNSSGEVQGQPIGVEYHRLRAFEQYLNGHARDGQEITLKIIP 97

Query: 86  AYRLSSLFPALKNGEVDIIAAGLSQSEERLKDFRAG-------PAYYYVSQQVVYKKGDW 138
             +   L  AL+ GE D++A G       L + +AG       P    V   +V  KG+ 
Sbjct: 98  MAK-DQLLGALQRGEGDLVAPG------ELLELQAGHAVSASDPIRTDVPLLLVGIKGEK 150

Query: 139 RPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQKYPDFQFHVDSNSDVNDL 198
           R    +QL  +  TL   N   A  SV   +      LA  +  P     VD    V D+
Sbjct: 151 RYTRVEQLSGK--TLALPNGSAAGDSVSQINQ----KLALLKLPPVKVEWVDPTLAVEDV 204

Query: 199 LKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPIS--WFIRRSDDESLYALMI 256
           L+ V  G    T+ +        +I P+L    ++   +P    WF+RR D   L A + 
Sbjct: 205 LEMVQGGIFHLTIVEQPIAERWSKILPKLRFDRQVLIGEPSDEYWFVRR-DAAMLRASID 263

Query: 257 EFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRWTPLFQKYSAE--FDW 314
            F    K    + + E+     I    Y       RA   RL +  P+ QK++     DW
Sbjct: 264 RFLATYK----VPANEDAAFLRIYRRLYQVHYPLARADRQRLEKLRPVLQKHADAQGMDW 319

Query: 315 RLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQSIRGGVEYLRRMM 374
             +AALA++ES   P A+S TG  GLM +T   A+ VGV +  + + +++ G +YL  + 
Sbjct: 320 LNLAALAFKESALQPNARSGTGPTGLMQITPSAAQRVGVDNIQNLDANVQAGAKYLALIR 379

Query: 375 ER--VPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADVKDRLPQLQQKK 432
            +      ++E E++ F LA+YN+G   +   R   + +G +P+ W    +R+   Q   
Sbjct: 380 RKFFASPKLNERERMAFVLAAYNMGPERVQGMRAEARRRGLNPNQWFFQVERIAMEQV-- 437

Query: 433 YFTQTRYGYARGDEARNYVENIRRYYQSIIGHLEQRQLATGDESI 477
                      G  A +YV ++ +YY +     E+  L  GD+ +
Sbjct: 438 -----------GMGAVSYVNSVNKYYLAF--DRERESLEPGDQKV 469