Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., glycosylase from Pseudomonas fluorescens FW300-N2C3

 Score = 92.0 bits (227), Expect = 4e-23
 Identities = 115/441 (26%), Positives = 188/441 (42%), Gaps = 42/441 (9%)

Query: 34  ELEKIRERGVLRVGTLNNPLSYYIGPDGPTGLDYELAREFAKELG--------VKLEMKP 85
           +L +IR   VL+V    +  S       P G++Y   R F + L         + L++ P
Sbjct: 38  DLAQIRSSRVLKVLVNQSRNSSGEVQGQPIGVEYHRLRAFEQYLNGHARDGQEITLKIIP 97

Query: 86  AYRLSSLFPALKNGEVDIIAAG-LSQSEERLKDFRAGPAYYYVSQQVVYKKGDWRPRSFK 144
             +   L  AL+ GE D++A G L + +       + P    V   +V  KG+ R    +
Sbjct: 98  KAK-DQLLGALQRGEGDLVAPGELLEPQAGHAVSASNPIRTEVPLLLVGIKGEKRYTRVE 156

Query: 145 QLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQKYPDFQFH-VDSNSDVNDLLKKVS 203
           QL  +  TL   N   A    V   + +  LL    K P  +   VD    V D+L+ V 
Sbjct: 157 QLSGK--TLALPNGSAAG-DAVSQINQKLALL----KLPPVKIEWVDPTLAVEDVLEMVQ 209

Query: 204 QGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPIS--WFIRRSDDESLYALMIEFFGN 261
            G    T+ +        +I P+L    ++   +P    WF+RR D   L A +  F   
Sbjct: 210 GGIFHLTIVEQPIAERWSKILPKLRFDRQVLIGEPGDEYWFVRR-DAAMLRASIDRFLVT 268

Query: 262 LKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRWTPLFQKYSAE--FDWRLVAA 319
            K    + S ++     I    Y       RA   RL    P+ QK++     DW  +AA
Sbjct: 269 YK----VPSNQDAAFLRIYRRLYQVHYPLARANRQRLENLRPVLQKHADAQGMDWLNLAA 324

Query: 320 LAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQSIRGGVEYLRRMMER--V 377
           LA++ES   P A+S  G  GLM +T   A+ VGV +  + + +++ G +YL  +  +   
Sbjct: 325 LAFKESALQPNARSGAGPTGLMQITPAAAQRVGVDNIQNLDANVQAGAKYLALIRRKFFA 384

Query: 378 PDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADVKDRLPQLQQKKYFTQT 437
              ++E E++ F LA+YN+G   +   R   + +G +P+ W    +R+   Q        
Sbjct: 385 SPKLNERERMAFVLAAYNMGPERVQGMRAEARRRGLNPNQWFFQVERIAMEQV------- 437

Query: 438 RYGYARGDEARNYVENIRRYY 458
                 G  A +YV ++ +YY
Sbjct: 438 ------GMGAVSYVNSVNKYY 452