Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., murein transglycosylase from Pseudomonas fluorescens FW300-N2E3

 Score =  332 bits (850), Expect = 3e-95
 Identities = 188/473 (39%), Positives = 283/473 (59%), Gaps = 19/473 (4%)

Query: 18  LSLLLVGCQIDSEPKSELEKIRERGVLRVGTLNNPLSYYIGPDGPTGLDYELAREFAKEL 77
           L L+L GC    +  + LE+++E GVLRV T N+P +Y+   +G TG +YEL + FA +L
Sbjct: 20  LFLMLSGCV---DKPNTLERVKEDGVLRVVTRNSPATYFQDRNGETGFEYELVKRFADDL 76

Query: 78  GVKLEMKPAYRLSSLFPAL-KNGEVDIIAAGLSQSEERLKDFRAGPAYYYVSQQVVYKKG 136
           GVKL+++ A  L  L+  L K G   + AAGL  S++R +  R   +Y  V+ Q++Y+ G
Sbjct: 77  GVKLKIETADNLDDLYGQLGKPGGPVLAAAGLVGSDKRKQQVRFSHSYLEVTPQIIYRNG 136

Query: 137 DWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQKYPDFQFHVDSNSDVN 196
             RP S   LV +   +LK +           +H +  L A ++KYP  ++      +V 
Sbjct: 137 QSRPTSAADLVGKTIMVLKGS-----------THADQ-LAALKKKYPGIEYEESDAVEVV 184

Query: 197 DLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPISWFIRRSDDESLYALMI 256
           DLL+ V +G++  T+ DS EV+++Q  +     AF+L +    SW +   DD SL   + 
Sbjct: 185 DLLRMVDEGQIDLTLVDSNEVAMNQVYFTNARVAFDLGDASNQSWAVAAGDDNSLLNEIN 244

Query: 257 EFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRWTPLFQKYSAE--FDW 314
           +F    +++G L  L+++Y GH+    Y+    F   L  RLP++   F+  + E   DW
Sbjct: 245 DFLDKAQKNGTLQRLKDRYYGHVDVLGYMGAYTFAEHLQQRLPKYEKHFKASAKEEKVDW 304

Query: 315 RLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQSIRGGVEYLRRMM 374
           RL+AA+ YQES W P   S TGVRGLMMLT  TA+++GVS+RLD +QSI GG +YL    
Sbjct: 305 RLLAAIGYQESLWQPAVTSKTGVRGLMMLTQNTAQAMGVSNRLDAKQSIMGGAKYLAYTK 364

Query: 375 ERVPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADVKDRLPQLQQKKYF 434
           +++ DSI E ++ WFALA+YN+G GH+ DAR+L   +G +PD W DVK  LP+L QK+++
Sbjct: 365 DQLDDSIQEPDRTWFALAAYNVGSGHLDDARKLAAKEGLNPDKWLDVKKILPRLSQKQWY 424

Query: 435 TQTRYGYARGDEARNYVENIRRYYQSIIGHLEQRQLATGDESIEDLTVIALDE 487
           ++TRYGYARG E  ++V NIRRYY  I+  + Q QL     +  +L V  +D+
Sbjct: 425 SKTRYGYARGGEPVHFVANIRRYY-DILTWVTQPQLEGDQVTQGNLHVPGIDK 476