Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., Transglycosylase, Slt family from Pseudomonas fluorescens FW300-N1B4

 Score =  340 bits (871), Expect = 9e-98
 Identities = 192/476 (40%), Positives = 287/476 (60%), Gaps = 26/476 (5%)

Query: 9   PIRALWLGLLSLLLV--GCQIDSEPKSELEKIRERGVLRVGTLNNPLSYYIGPDGPTGLD 66
           P  A WL    L LV  GC    +  + LE+++E GVLRV T N+P +Y+   +G TG +
Sbjct: 9   PRYAKWLIATGLFLVLGGCV---DKPNTLERVKEDGVLRVVTRNSPATYFQDRNGETGFE 65

Query: 67  YELAREFAKELGVKLEMKPAYRLSSLFPAL--KNGEVDIIAAGLSQSEERLKDFRAGPAY 124
           YEL + FA++LGV+L+++ A  L  LF  +   NG V + AAGL  SEER K  R   +Y
Sbjct: 66  YELVKRFAEDLGVELKIETADNLDDLFNQVGKPNGPV-LAAAGLVSSEERKKQVRFSHSY 124

Query: 125 YYVSQQVVYKKGDWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQKYPD 184
             V+ Q++Y+ G  RP     LV ++  +LK +           +H E  L   ++KYP 
Sbjct: 125 LEVTPQIIYRNGQSRPTDAGDLVGKKIMVLKGS-----------THAEQ-LAELKKKYPG 172

Query: 185 FQFHVDSNSDVNDLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPISWFIR 244
            ++      +V DLL+ V + ++  T+ DS EV+++Q  +P +  AF+L +    SW + 
Sbjct: 173 IEYEESDAVEVVDLLRMVDEAQIDLTLVDSNEVAMNQVYFPNVRVAFDLGDASNQSWAVA 232

Query: 245 RSDDESLYALMIEFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRWTPL 304
             +D SL   + ++   +K++G L  L+++Y GH+    Y+    F + L  RLP++   
Sbjct: 233 TGEDNSLLNEINDYLDKVKKNGTLQRLKDRYYGHVDVLGYMGAYTFAQHLQQRLPKYEQH 292

Query: 305 FQKYSAE--FDWRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQS 362
           F+ Y+ +   DWRL+AA+ YQES W     S TGVRGLMMLT  TA+++GVS+RLDP+QS
Sbjct: 293 FKTYAKKEKVDWRLLAAIGYQESLWQAAVTSKTGVRGLMMLTQNTAQAMGVSNRLDPKQS 352

Query: 363 IRGGVEYLRRMMERVPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADVK 422
           I GG +YL  M E++ +SI E ++ WFALA+YN+G GH+ DAR+L   +G +PD W DVK
Sbjct: 353 IMGGAKYLAYMKEQLDESIQEPDRTWFALAAYNVGSGHLDDARKLAAKEGLNPDKWLDVK 412

Query: 423 DRLPQLQQKKYFTQTRYGYARGDEARNYVENIRRYYQSII----GHLEQRQLATGD 474
             LP+L QK+++++TRYGYARG E  ++V NIRRYY  +       LE  Q+A G+
Sbjct: 413 KILPRLSQKQWYSKTRYGYARGGEPVHFVANIRRYYDILTWVTQPQLEGNQVAEGN 468