Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas fluorescens FW300-N1B4

 Score = 51.6 bits (122), Expect = 3e-11
 Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 7/118 (5%)

Query: 17  LLSLLLVGCQIDSEPKSE--LEKIRERGVLRVGTLNN-PLSYYIGPD-GPTGLDYELARE 72
           LL+ L     +   P     LE + +RG L+V    + P    +GPD  P GLD + A+ 
Sbjct: 8   LLAALFASLMLSQAPAHADGLEDVVKRGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAKL 67

Query: 73  FAKELGVKLEMKPAYRLSSLFPALKNGEVDIIAAGLSQSEERLK--DFRAGPAYYYVS 128
            A +L VKLE+ P    ++  P L  G+VD++ + L ++ ER K  DF    A +Y++
Sbjct: 68  LADQLKVKLELTPV-NSTNRIPFLTTGKVDLVISSLGKNPEREKVIDFSRAYAPFYLA 124