Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein from Pseudomonas stutzeri RCH2

 Score =  102 bits (254), Expect = 3e-26
 Identities = 112/426 (26%), Positives = 185/426 (43%), Gaps = 41/426 (9%)

Query: 16  GLLSLLLVGCQI--DSEPKSELEKIRERGVLRVGTLNNPLSYYIGPDGPTGLDYELAREF 73
           GL S  + G ++   ++   +L +IR  GVLRV    +  S         G++Y   R F
Sbjct: 18  GLASARVAGPEVWQSTDKVRDLAEIRRSGVLRVLVNQSRNSSGEIKGEAIGVEYARLRAF 77

Query: 74  AKELG--------VKLEMKPAYRLSSLFPALKNGEVDIIAAGLSQSEERLKDF-RAGPAY 124
            + L         + L++ P  +   L  AL+ GE D++A G       +K   R+ P  
Sbjct: 78  EQHLNRDAASGKSITLKIIPKAK-DQLLGALQRGEGDLVAPGELLPLAGMKGISRSRPVV 136

Query: 125 YYVSQQVVYKKGDWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQKYPD 184
             VS  +V ++G  R +  +QL  R   L   +      + ++    E  L       P 
Sbjct: 137 RDVSLVLVGRQGGPRYQRLEQLSGRSLALPPGSAAGPALARLNKQLMERKLA------PI 190

Query: 185 FQFHVDSNSDVNDLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELT--EDQPISWF 242
               VD    V D+L+ V  G    T+ +        ++ P+L     L+  +   + WF
Sbjct: 191 VVEWVDPTLAVEDVLEMVQAGVYPATVVEQTIAQRWAKVMPKLRIEQNLSLGDKASMHWF 250

Query: 243 IRRSDDESLYALMIEFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFI------RALDT 296
           +R+  D S+     + F  LK     A+ +        AF+ V  R +       R    
Sbjct: 251 VRK--DASMLRASADRF--LKDFALPANQD-------AAFERVYRRLYKVQYPLDRLGRQ 299

Query: 297 RLPRWTPLFQKYSA--EFDWRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVS 354
           RL +  P  Q+Y+   E DW  +AALA++ES  NP AK   G  GLM +T  TAR++GVS
Sbjct: 300 RLEKVRPTLQRYAEQIELDWLNLAALAFKESTLNPAAKGAGGATGLMQVTPATARAMGVS 359

Query: 355 DRLDPEQSIRGGVEYLRRMMER--VPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQG 412
           +    + +++   +YL  +         ++E E++ F LA+YN+G   +   R   + +G
Sbjct: 360 NIQQLDNNVQASAKYLANIRRNHFASPRLNERERMAFILAAYNLGPQRVQSMRAEARRRG 419

Query: 413 ADPDSW 418
            +PD W
Sbjct: 420 LNPDQW 425