Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein from Pseudomonas stutzeri RCH2

 Score =  353 bits (905), Expect = e-101
 Identities = 193/484 (39%), Positives = 293/484 (60%), Gaps = 20/484 (4%)

Query: 12  ALWLGLLSLLLVGCQIDSEPKSELEKIRERGVLRVGTLNNPLSYYIGPDGPTGLDYELAR 71
           A+WL    L L+      +P SELE+I+E GVLRV T N+P +Y+   +G  G +YEL +
Sbjct: 12  AIWLLATGLFLMLSSCAEKP-SELERIQEEGVLRVITRNSPSTYFQDRNGEAGFEYELVK 70

Query: 72  EFAKELGVKLEMKPAYRLSSLFPALKN-GEVDIIAAGLSQSEERLKDFRAGPAYYYVSQQ 130
            FA  LGV+L+++ A  +  +F  L   G   + AAGL  SE R++  R   +Y  V+ Q
Sbjct: 71  RFASNLGVELQIETADNIEEIFSRLNRPGGPALAAAGLVASEGRMELARFTRSYLDVTTQ 130

Query: 131 VVYKKGDWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQKYPDFQFHVD 190
           VVY+ G  RP + + L+ ++  +LK + +               L + Q +YP+ ++   
Sbjct: 131 VVYRSGQRRPTNPQDLIGKRILVLKGSSQA------------EKLASLQAEYPELRYEES 178

Query: 191 SNSDVNDLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPISWFIRRSDDES 250
              +V DLL+ V +G++  T+ +S E+S++Q  +  + A F++ E   ++W + + +D+S
Sbjct: 179 DAVEVVDLLRMVDEGQIDLTLVESNEMSMNQVYFTNIRAGFDVGEQNSLAWIVAKGEDDS 238

Query: 251 LYALMIEFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRWTPLFQKYSA 310
           L      F    +Q+G L  L E+Y GH+    YV   AF + L  RLPR+   F++ + 
Sbjct: 239 LLKAADAFLEQAQQNGTLQRLRERYYGHVDVLGYVGAYAFAKHLQQRLPRYEKAFRETAK 298

Query: 311 E--FDWRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQSIRGGVE 368
           +   DWRL+AA+ YQESHW P A S TGVRGLMMLTL TA ++GV++RLDP QSI+GG +
Sbjct: 299 QHGIDWRLLAAIGYQESHWQPEATSKTGVRGLMMLTLRTANAMGVTNRLDPVQSIQGGGK 358

Query: 369 YLRRMMERVPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADVKDRLPQL 428
           YL ++   +P+SI E ++ WFALA+YN+G GH+ DAR+L +++G DP+ W DVK  LP+L
Sbjct: 359 YLVKIHTGLPESIEEPDRTWFALAAYNVGGGHLEDARKLAEAEGLDPNKWLDVKQMLPRL 418

Query: 429 QQKKYFTQTRYGYARGDEARNYVENIRRYYQSII----GHLEQRQLATGDESIEDLTVIA 484
            QK+++++TRYGYARG E  ++V NIRRYY  +       +E +QLA  D  I  +    
Sbjct: 419 SQKQWYSKTRYGYARGGEPVHFVANIRRYYDILTWVTQPQMEGQQLAKSDLHIPGIYATD 478

Query: 485 LDEE 488
           L EE
Sbjct: 479 LMEE 482