Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., SLT from Pseudomonas syringae pv. syringae B728a

 Score = 96.3 bits (238), Expect = 2e-24
 Identities = 106/411 (25%), Positives = 178/411 (43%), Gaps = 27/411 (6%)

Query: 34  ELEKIRERGVLRVGTLNNPLSYYIGPDGPTGLDYELAREFAKEL------GVKLEMKPAY 87
           +L  IR   VLRV    +  S         G++Y   + F + L      G K+ +K   
Sbjct: 38  DLPAIRSSKVLRVLVNQSRNSSGDVKGQEIGVEYHRLQAFEQYLNSHSRAGQKVTIKVIP 97

Query: 88  RLSS-LFPALKNGEVDIIAAGLSQSEERLKDFRAG-PAYYYVSQQVVYKKGDWRPRSFKQ 145
           +  + L  AL+ GE D+IA G        K  +A  P  + V   +V  +G    R   Q
Sbjct: 98  KAKNQLLTALQRGEGDMIAPGELLDVSDAKGIQASAPIVHDVPLVLVGVRGQRSVRRVDQ 157

Query: 146 LVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQKYPDFQFH-VDSNSDVNDLLKKVSQ 204
           L  +  +L          S  D++  +     + +K P  +   VD +  V D+L+ V  
Sbjct: 158 LSGKTLSLPTG-------SAADEALHQVNRQLELRKLPLAKIEWVDPSLAVEDVLEMVQA 210

Query: 205 GELLFTMADSVEVSLSQRIYPELAAAFELTEDQ--PISWFIRRSDDESLYALMIEFFGNL 262
           G    T+ +        RI P+L     LT      ISWF+R +  + L A + +F  + 
Sbjct: 211 GIYPMTLVEQPIAERWARIMPKLRIERGLTLQTHGDISWFVRDNATQ-LRASVDDFLKDY 269

Query: 263 KQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRWTPLFQKYSAE--FDWRLVAAL 320
           K S      +++   +     Y      +R    RL +  P+ Q+++     DW  +AAL
Sbjct: 270 KPSAQ----QDQVFANAYKNTYKVNNPLVRNNLQRLEQLRPMLQRHADAQGMDWLDLAAL 325

Query: 321 AYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQSIRGGVEYLRRMMERVPDS 380
           A++ES  +P AK   G  GL+ +T   A+SVGV      + +IR G  Y+  +  +   S
Sbjct: 326 AFKESKLDPSAKGSGGATGLLQITPSAAKSVGVPSIQSADDNIRAGSRYMALIQRKYFSS 385

Query: 381 --ISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADVKDRLPQLQ 429
             ++E E++ F +A+YN+G   +   R   + +G +P+ W    +R+   Q
Sbjct: 386 NRVNERERMAFVMAAYNLGPERVQGMREEARRRGLNPNQWFFQTERVAMEQ 436