Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., extracellular solute-binding protein, family 3:SLT from Pseudomonas syringae pv. syringae B728a

 Score =  326 bits (835), Expect = 1e-93
 Identities = 190/483 (39%), Positives = 286/483 (59%), Gaps = 19/483 (3%)

Query: 9   PIRALWLGLLSL-LLVGCQIDSEPKSELEKIRERGVLRVGTLNNPLSYYIGPDGPTGLDY 67
           P  A WL    L L++G  +  E  + LE+++E GVLRV T N+P +Y+   +G TG +Y
Sbjct: 9   PRCAKWLIATGLFLMLGACV--EKPTTLERVKEDGVLRVITRNSPATYFQDRNGETGFEY 66

Query: 68  ELAREFAKELGVKLEMKPAYRLSSLFPAL-KNGEVDIIAAGLSQSEERLKDFRAGPAYYY 126
           EL + FA +LGV+L+++ A  L  LF  + K G   + AAGL ++  R +  R   +Y  
Sbjct: 67  ELVKRFADDLGVELKIETADNLDDLFDQMNKPGGPVLGAAGLIETPLRKQQARFSHSYLE 126

Query: 127 VSQQVVYKKGDWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQKYPDFQ 186
           V+ QVVY+ G  RP     LV ++  +LK +           +H E     K Q  P  Q
Sbjct: 127 VTPQVVYRNGQSRPTDPGDLVGKRIVVLKGS-----------AHAEQLAALKAQN-PGIQ 174

Query: 187 FHVDSNSDVNDLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPISWFIRRS 246
           +      +V DLL+ V +G++  T+ DS E++++Q  +P +  AF+L E +   W +   
Sbjct: 175 YEESDAVEVVDLLRMVDEGQIDLTLVDSNELAMNQVYFPNVRVAFDLGEARAQRWAVAPG 234

Query: 247 DDESLYALMIEFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRWTPLFQ 306
           +D SL   +  +   ++++G L  L+++Y GH+    YV    F + L  RLP++   FQ
Sbjct: 235 EDNSLLNEINAYLDKVEKNGTLQRLKDRYYGHVDVLGYVGAYTFAQHLQERLPKYEKHFQ 294

Query: 307 KYSA--EFDWRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQSIR 364
             +   + DWRL+AA+ YQES W P   S TGVRGLMMLT  TA+++GVS+RLD  QSI+
Sbjct: 295 TSAKKEQVDWRLLAAIGYQESMWQPTVTSKTGVRGLMMLTQNTAQAMGVSNRLDARQSIQ 354

Query: 365 GGVEYLRRMMERVPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADVKDR 424
           GG +Y   + +++ DSI E ++ W ALASYNIG GH+ DAR+L +++G +PD W DVK  
Sbjct: 355 GGAKYFAYIKDQLDDSIKEPDRTWLALASYNIGSGHLEDARKLAQNEGLNPDKWLDVKKM 414

Query: 425 LPQLQQKKYFTQTRYGYARGDEARNYVENIRRYYQSIIGHLEQRQLATGDESIEDLTVIA 484
           LP+L QKK++++TRYGYARG E  ++V NIRRYY  I+  + Q QL     +  +L V  
Sbjct: 415 LPRLAQKKWYSKTRYGYARGGEPVHFVANIRRYY-DILTWVTQPQLEGSQVADGNLHVPG 473

Query: 485 LDE 487
           +D+
Sbjct: 474 VDK 476