Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 502 a.a., Slt family transglycosylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  414 bits (1065), Expect = e-120
 Identities = 213/458 (46%), Positives = 301/458 (65%), Gaps = 25/458 (5%)

Query: 11  RALWLGLLSLLLVGCQ-----IDS-EPKSELEKIRERGVLRVGTLNNPLSYYIGPDGPTG 64
           R L+L    L+L  CQ     +D+ +PK+E E       LRVGTL     Y     G +G
Sbjct: 27  RVLFLLTSVLVLTACQPPGLVVDAPQPKAEAE------TLRVGTLYGAQIYMSSGQGLSG 80

Query: 65  LDYELAREFAKELGVKLEMKPAYRLSSLFPALKNGEVDIIAAGLSQSEERLKDFRAGPAY 124
            DYELA++FA  LG  LEM+P    S L+ AL  GE+D+IAAG+++S  R   FR GP  
Sbjct: 81  FDYELAQKFADYLGKPLEMQPYSNRSELYDALAKGEIDLIAAGITESPNRRNRFRMGPPL 140

Query: 125 YYVSQQVVYKKGDWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQKYPD 184
           Y V Q VVY++G+  P S +QL                 +VV DS F  TL   QQ + +
Sbjct: 141 YRVDQVVVYRQGNRAPESIEQLSGN-------------LTVVADSAFVETLTRLQQTHTN 187

Query: 185 FQFHVDSNSDVNDLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPISWFIR 244
             +   S  D ++L+  ++ GEL +T+A S  + +++R  PEL +   L E  P+ W + 
Sbjct: 188 LSWEQTSEKDNDELIAMIASGELNYTLAQSTSLDINRRYMPELRSGLVLEEKVPVVWLLP 247

Query: 245 RSDDESLYALMIEFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRWTPL 304
             + ++L + ++ F+   K++G LA L EKY GH+  FDYVDTRAFIRA+D +LPR+ PL
Sbjct: 248 AQNSDALMSKLLAFWHQEKRAGTLAHLNEKYFGHVKRFDYVDTRAFIRAIDAKLPRYRPL 307

Query: 305 FQKYSAEFDWRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQSIR 364
           F++Y+ + DWR +AA +YQESHWNP A+SPTGVRG+MMLT  TA  +GV++RLDP QSIR
Sbjct: 308 FEEYAGDLDWRKLAAASYQESHWNPNARSPTGVRGMMMLTNATASQLGVTNRLDPRQSIR 367

Query: 365 GGVEYLRRMMERVPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADVKDR 424
           GG +YLR ++ R+P+SI E++++WFALA+YNIG GH+ DARRL ++QG +P +W DVK  
Sbjct: 368 GGADYLRDLINRLPESIPENQRMWFALAAYNIGLGHLEDARRLAEAQGLNPSAWRDVKQV 427

Query: 425 LPQLQQKKYFTQTRYGYARGDEARNYVENIRRYYQSII 462
           LP LQ++K+++QTRYGYARG EA +YV++IRRYY +++
Sbjct: 428 LPLLQKRKFYSQTRYGYARGGEAVHYVDSIRRYYDTLV 465