Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 725 a.a., extracellular solute-binding protein (RefSeq) from Shewanella loihica PV-4

 Score = 53.1 bits (126), Expect = 3e-11
 Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 18/166 (10%)

Query: 26  QIDSEPKSELEKIRERGVLRVGTL--NNPLSYYIGPDGPTGLDYELAREFAKELGVKLEM 83
           Q  S P +++  IR RG+LRVG +  N P SYY       G D  +A   A +LGVK+E 
Sbjct: 465 QSASRPIADVNAIRARGLLRVGYIPSNVPFSYYNNAGQLVGFDSAMANRLADDLGVKVEF 524

Query: 84  KPAYRLSSLFPALKNGEVDIIAAGLSQSEERLKDFRAGPAYYYVSQQVVYKKGDWRPRSF 143
            P +    L  +L  G  DI  +GL+   E++           ++  +  K  D +  SF
Sbjct: 525 IP-FEKDKLAASLDAGFFDIAMSGLAMDIEQMDKLNYVEPVLLLNLAIATK--DHKVNSF 581

Query: 144 KQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQK--YPDFQF 187
           K+           N  +        ++ EH+ + +  K  YP+ +F
Sbjct: 582 KR-----------NQSIKAMQDTTIAYVEHSDIIEDAKAFYPNLKF 616