Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., putative soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein from Dechlorosoma suillum PS

 Score =  240 bits (613), Expect = 7e-68
 Identities = 159/467 (34%), Positives = 243/467 (52%), Gaps = 34/467 (7%)

Query: 11  RALWLGLLSLLLVGCQIDSEPKSELEKIRERGVLRVGTLNNPLSYYIGP-----DGPTGL 65
           R L + LL+L+LV    D +  S     RE   L V T   PL+Y  G      +   G 
Sbjct: 7   RWLLVALLALVLVYACADRKVASW----RESNELVVLTSPGPLTYTPGAQDNGGEAGAGF 62

Query: 66  DYELAREFAKELGVKLEMKPAYRLSSLFPALKNGEVDIIAA------GLSQSEERLKDFR 119
           +Y+L   FA+E G+KL++        +  ALK G   + AA      G++ SE     F+
Sbjct: 63  EYDLVSLFAEEAGLKLKLVSVGNYREVAQALKRGAGHMAAAWLVWHPGVANSE-----FQ 117

Query: 120 AGPAYYYVSQQVVYKKGDWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQ 179
           A   ++  S  +V  +      S +QL  R   ++  +      + +   +   T+    
Sbjct: 118 ATTPFFQSSHLLVQHEASLPITSTEQLAGRTVHVVARSRHADLLAGLPALNPPVTV---- 173

Query: 180 QKYPDFQFHVDSNSDVNDLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPI 239
           Q++P++       SD+ DLL+ V++  +   + D   + ++Q  YP+L+A  ++ E QPI
Sbjct: 174 QEHPEW-------SDL-DLLQAVAEQRIELALTDGPILDIAQNYYPQLSATLQIGEPQPI 225

Query: 240 SWFIRRSDDESLYALMIEFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLP 299
           +W      D  L A    F G + + G L  L+++Y GH+      D   F+    + LP
Sbjct: 226 AWLFPGDADPELVAKAEAFLGRVHKDGTLVRLKDRYFGHVRRLKQFDVVQFLERTRSLLP 285

Query: 300 RWTPLFQKYSAE--FDWRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRL 357
            +   F+   A    DWRL+AALAYQES W+P A SPTGVRG+MMLT  TA  +GVS+RL
Sbjct: 286 DFRTQFESAQARTGIDWRLIAALAYQESQWDPMATSPTGVRGMMMLTEETADRLGVSNRL 345

Query: 358 DPEQSIRGGVEYLRRMMERVPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDS 417
           DP+QSI  G  YL  + +++P+++ E ++ W ALA+YN+G GHM     +  S  ADPDS
Sbjct: 346 DPKQSISAGARYLADIRDQLPETVKEPDRTWMALAAYNLGLGHMKGGLAIAPSTEADPDS 405

Query: 418 WADVKDRLPQLQQKKYFTQTRYGYARGDEARNYVENIRRYYQSIIGH 464
           W ++K  LP L + +Y+ + + G ARG EA   VENIR +Y  +  H
Sbjct: 406 WFEMKRVLPLLSRPEYYRRLKSGRARGGEAVIMVENIRIFYDILTRH 452