Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 581 a.a., Lytic transglycosylase catalytic (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  134 bits (337), Expect = 9e-36
 Identities = 81/219 (36%), Positives = 125/219 (57%), Gaps = 5/219 (2%)

Query: 248 DESLYALMIEFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRWTPLFQK 307
           D  L  L   +FG L +S  +A  +  Y G  G  D  D    +  +  +LP   P   +
Sbjct: 339 DTLLDDLTERYFGFLPESLGVAE-DGDYTGASGYADIFDLMDLMTVVTEKLPAHAPAISR 397

Query: 308 YSAE--FDWRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQSIRG 365
            +A+   D  L++A+ +QES ++  A+S TGVRG+M LT  TA  + V+ R++P QSIRG
Sbjct: 398 AAAQSNIDPLLLSAVIFQESRFDASARSKTGVRGIMQLTQNTALLLKVN-RMNPSQSIRG 456

Query: 366 GVEYLRRMMERVPD-SISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADVKDR 424
           G  YLR + + + D  +   ++ +F LA++N G GH+ DA RL +  G    +W ++KD 
Sbjct: 457 GARYLRMLWDSLDDLDLQPWDRWFFTLAAFNQGPGHLRDAIRLNQDLGGSGRTWRELKDT 516

Query: 425 LPQLQQKKYFTQTRYGYARGDEARNYVENIRRYYQSIIG 463
            P+L + +Y  +TRYGY RG EA  +VE++R YY  + G
Sbjct: 517 FPKLARPRYHARTRYGYCRGYEAVAFVESVRYYYYILNG 555