Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., transglycosylase, Slt family protein from Marinobacter adhaerens HP15

 Score =  344 bits (883), Expect = 4e-99
 Identities = 184/451 (40%), Positives = 268/451 (59%), Gaps = 19/451 (4%)

Query: 19  SLLLVGCQIDSEPKSELEKIRERGVLRVGTLNNPLSYYIGPDGPTGLDYELAREFAKELG 78
           +L+L GC   S+P S L++IR+ GVL V T   P  Y    DGPTG DYELA+ FA++LG
Sbjct: 24  ALILTGC---SQP-STLQEIRDEGVLHVITRTAPSIYVESEDGPTGYDYELAKLFAEDLG 79

Query: 79  VKLEMKPAYRLSSLFPALKNGEVDIIAAGLSQSEERLKDFRAGPAYYYVSQQVVYKKGDW 138
           VKL ++ A   + +   L+         GLS+       +R           +VY +   
Sbjct: 80  VKLRVRVADSNTEILSVLEKNYAHFGMLGLSRQPHTANQYRTVATGITAQSILVYNRDVE 139

Query: 139 RPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQKYPDFQFHVDSNSDVNDL 198
           RP S + L+ +               VV DS+ EH L   +Q+  + ++ V    D   +
Sbjct: 140 RPESLQDLIGKT------------VHVVSDSNHEHRLNEARQENAELEWEVHPGLDAAGV 187

Query: 199 LKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPISWFIRRSDDESLYALMIEF 258
           L +V  GE  + M  S E+ L+   YP +  AF + E   ++WF   + D+SL     +F
Sbjct: 188 LSRVESGEFPYAMVSSNELDLNHVFYPMVKEAFTVGEPGELAWFFPSAQDDSLAKAARQF 247

Query: 259 FGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRWTPLFQKYSAEF--DWRL 316
             +L+ +G LA + E++ GH+   +YV  R F+  ++ RLP++  LF+ Y+ +F  DWRL
Sbjct: 248 LESLETNGTLAQISERFYGHLDRLNYVGARTFMHHVENRLPKYESLFRDYARDFNMDWRL 307

Query: 317 VAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQSIRGGVEYLRRMMER 376
           +AA+ YQESHW P A SPTGVRGLMMLT  TA  +G+++RLD E+SI+GG +Y R + E+
Sbjct: 308 LAAIGYQESHWRPNAVSPTGVRGLMMLTRNTASHIGINNRLDAEESIQGGAKYFRIVHEK 367

Query: 377 VPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADVKDRLPQLQQKKYFTQ 436
           +P+ I E ++ WFALASYN+G+GH+ DARRLT+  G DPD W DVK+ LP L +K+++T+
Sbjct: 368 IPERIPEPDRTWFALASYNVGFGHLEDARRLTEGAGRDPDRWMDVKEFLPLLAEKEWYTK 427

Query: 437 TRYGYARGDEARNYVENIRRYYQSIIGHLEQ 467
           TR+GYARG E   YV+NIRRYY  ++  L Q
Sbjct: 428 TRFGYARGHEPVIYVQNIRRYY-DVLARLNQ 457