Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 239 a.a., transglycosylase SLT domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 54.7 bits (130), Expect = 4e-12
 Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 11/115 (9%)

Query: 283 DYVDTRAFIRALDTRLPRWTPLFQKYSAEFDWRLVAALAYQESHWNPYAKSPTGVRGLMM 342
           D+   R F R  D+ + R     Q      D  L+ A+ + ES +N  A S  G  GLM 
Sbjct: 101 DWNGIRLFTRNYDSLISRAADKHQ-----LDPALIRAVIHAESAFNARAVSRAGAMGLMQ 155

Query: 343 LTLPTARSVGVSDRLDPEQSIRGGVEYLRRMMERVPDSISEHEKIWFALASYNIG 397
           L   TA+ +GV++   PE++I GG +YL +M+++    I+       A A+YN G
Sbjct: 156 LMPETAKDMGVTNAFLPEENILGGSKYLAQMLKQFNGDIA------LACAAYNAG 204