Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 508 a.a., lytic transglycosylase F from Klebsiella michiganensis M5al

 Score =  113 bits (283), Expect = 1e-29
 Identities = 118/479 (24%), Positives = 204/479 (42%), Gaps = 75/479 (15%)

Query: 32  KSELEKIRERGVLRVGTLNNPLSYYIGPDGPTGLDYELAREFAKELGVKL--EMKPAYR- 88
           K +L  + +R  +RV T  +   ++I      G  +++  EF + L   L  E K  +R 
Sbjct: 55  KGDLPGMLDRRTIRVLTTFSKTFFFINKGTQRGATHDIFMEFERSLNQSLAKEKKLKHRH 114

Query: 89  -----------LSSLFPALKNGEVDIIAAGLSQSEERLKDFR-AGPAYYYVSQQVVYKKG 136
                         L  AL  G+ DIIAA L+ +  R ++     P Y +V + ++   G
Sbjct: 115 LKVRIIFVPVARDQLISALNAGKGDIIAANLTITPARQQEMTFTAPIYSHVQELLLSGPG 174

Query: 137 DWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTL-----LAKQQKYPDFQFHVDS 191
             +  + +QL  +             F     S++E  +      A+Q   P        
Sbjct: 175 SPKVENLQQLSGK-----------TVFVRTSSSYYESLVALNARFAQQSLPPITITSAPE 223

Query: 192 NSDVNDLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFE--LTEDQPISWFIRRSDDE 249
             +  DL++ +S G +  T+ D  +    ++++P +       L  +  I W +R +  +
Sbjct: 224 ALEDEDLIEMLSAGLIPLTVVDRHKALFWKQVFPSIQVHQNIILRNEGNIGWAVRNNSPQ 283

Query: 250 SLYALMIEFFGNLKQSGYLASL-------EEKYIGHIGAFDYVDTRAFIRALDTRLPRWT 302
            L AL+ EF    +Q   L +        + +Y+ +  A    + R F+  ++       
Sbjct: 284 -LLALLNEFINKNRQGSKLGNTILLRYLKDARYVKNAAA--QKERRKFLTMVE------- 333

Query: 303 PLFQKYSAEFD--WRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPE 360
            +F+KY   +D  W L+AA  YQES  N   +S  G  G+M +   T R + V D    +
Sbjct: 334 -IFRKYGDRYDVDWLLMAAQGYQESRLNQSVRSHVGAIGVMQVMPGTGRELNVGDIKLLD 392

Query: 361 QSIRGGVEYLRRMMERV--PDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSW 418
            +I  GV+Y+R M++R    + +++ +K  F+ ASYN G   +   R  TK +G DP+ W
Sbjct: 393 PNIHAGVKYMRWMIDRYYGDEPMTQLDKALFSFASYNAGPARIARLRADTKKRGFDPNVW 452

Query: 419 ADVKDRLPQLQQKKYFTQTRYGYAR--GDEARNYVENIRRY---YQSIIGHLEQRQLAT 472
                          F    Y  A   G E  +YV NI +Y   Y+ I+  + ++QLAT
Sbjct: 453 ---------------FGNVEYLAAEKIGSETVSYVSNIYKYYIAYRLIVDEMARKQLAT 496