Pairwise Alignments

Query, 530 a.a., lytic transglycosylase F from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., lytic transglycosylase, catalytic (RefSeq) from Shewanella sp. ANA-3

 Score =  382 bits (982), Expect = e-110
 Identities = 198/467 (42%), Positives = 295/467 (63%), Gaps = 18/467 (3%)

Query: 11  RALWLGLLSLLLVGCQIDSEPKSEL--EKIRERGVLRVGTLNNPLSYYIGPDGPTGLDYE 68
           R L+  +L  LL  CQ  +  ++E    K+ E   LRVGTL  P  Y     G +G DY+
Sbjct: 3   RFLFAIILGFLLTACQQVTVEETEYVPHKLTE---LRVGTLYGPQIYMTSGQGNSGFDYD 59

Query: 69  LAREFAKELGVKLEMKPAYRLSSLFPALKNGEVDIIAAGLSQSEERLKDFRAGPAYYYVS 128
           +A  FA+ L V L+M P    + L+ ALK  E+DIIAAG++++  R + FR GP  Y V+
Sbjct: 60  MAVLFAEYLDVPLKMVPYTNRAELYDALKKNEIDIIAAGMTETPARREQFRLGPPLYRVN 119

Query: 129 QQVVYKKGDWRPRSFKQLVERQQTLLKDNPELAFFSVVDDSHFEHTLLAKQQKYPDFQFH 188
           Q +VY++G   P+    L  +              +V+ DS F  TL   Q+++P   + 
Sbjct: 120 QVLVYREGMPTPKDITDLKGK-------------ITVIADSSFVETLTQLQKRHPTLVWD 166

Query: 189 VDSNSDVNDLLKKVSQGELLFTMADSVEVSLSQRIYPELAAAFELTEDQPISWFIRRSDD 248
             ++ D  +LL  ++  E+ +T+ADS  V +++R  P+L +   L E   + W +  +  
Sbjct: 167 QVTDKDSEELLAMIANKEIDYTIADSSSVQINRRYLPDLRSGLVLEEKLDVVWLLPPTHS 226

Query: 249 ESLYALMIEFFGNLKQSGYLASLEEKYIGHIGAFDYVDTRAFIRALDTRLPRWTPLFQKY 308
           + L + ++ F+   K +G L  L EKY GH+  FDY+DTRAF+RA++T LPR+  LF+ +
Sbjct: 227 DGLMSQLLAFWHQEKLAGTLDHLNEKYFGHVKRFDYIDTRAFLRAIETVLPRYRQLFETH 286

Query: 309 SAEFDWRLVAALAYQESHWNPYAKSPTGVRGLMMLTLPTARSVGVSDRLDPEQSIRGGVE 368
           + + DWR +AA +YQESHWNP A+SPTGVRG+MMLT PTA+ +G+++RLD E+SIRGG  
Sbjct: 287 AGDLDWRKLAATSYQESHWNPNARSPTGVRGMMMLTQPTAKEIGITNRLDAEESIRGGAA 346

Query: 369 YLRRMMERVPDSISEHEKIWFALASYNIGYGHMMDARRLTKSQGADPDSWADVKDRLPQL 428
           YLR M+ R+P+SI E +++WFALASYNIGY H+ DAR+L +S   +P++W D+K  LP L
Sbjct: 347 YLRDMINRLPESIPESQRMWFALASYNIGYAHVEDARKLAESMELNPNAWRDLKKVLPLL 406

Query: 429 QQKKYFTQTRYGYARGDEARNYVENIRRYYQSIIGHLEQRQLATGDE 475
           Q++KY+ +TRYGYARG EA +YV++IRRYY +++    Q +    DE
Sbjct: 407 QKRKYYQKTRYGYARGSEAVHYVDSIRRYYDTLVWVDNQSKQQNSDE 453