Pairwise Alignments

Query, 519 a.a., aminobenzoyl-glutamate transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., putative efflux pump component MtrF (RefSeq) from Shewanella amazonensis SB2B

 Score =  423 bits (1088), Expect = e-123
 Identities = 224/521 (42%), Positives = 326/521 (62%), Gaps = 18/521 (3%)

Query: 12  AKPSGMDRFLNFIERAGNKIPDPAILFFWALVIVWVSSALLSNVSFDLTNPRTNEA---- 67
           AK     RFLN +ER GN +P P  LF    V V + S +L      +T+PR   A    
Sbjct: 18  AKSGWFVRFLNLVERLGNLLPHPITLFAMFCVAVVLLSGILGYFELSVTDPRPEGASGRS 77

Query: 68  ----LEIKNLLTGESLAHFLANMVTTFTSFAPLGIVLVAMLGVGVADSSGFITTGLKKML 123
               + + +L+  E L   ++N+VT FT F PLG VLVA+LGVG+A+ SG ++  ++ ++
Sbjct: 78  ADGIISVVSLMNAEGLRLIVSNLVTNFTGFTPLGTVLVALLGVGIAERSGLLSAAMRALV 137

Query: 124 NVTPAKLLTPMLILVAIISHTAADAGYVLVIPLGGIIFHAAGRHPLAGIAAAFAGVSGGF 183
                +L+T  ++   I+S+TA++ GYV++IP+  +IFH+ GRHPLAG+AAAFAGVSGG+
Sbjct: 138 IGRSRRLVTVTIVFAGIVSNTASELGYVVLIPMAAMIFHSLGRHPLAGLAAAFAGVSGGY 197

Query: 184 SANFIPSGIDPLLAGFTQTAAQVLDQSYQVNPLANIYFTGLSSIIIVAIGWYVTDKVIEP 243
           SAN +   IDPLL+G T+ AA+++D  Y V P  N YF   S+ ++  +G +VT+K++EP
Sbjct: 198 SANLLLGTIDPLLSGITEAAARMIDPEYVVGPEVNWYFMFASTFVVSFMGAWVTEKIVEP 257

Query: 244 RL-----AATKVDEDAESAPDLGSFTAIESKAFRYAGWAMVAGIALLVAAVWPENSALRS 298
           +L     +   VD D ++   +   T IE    + AG A++    +L   V PE + LR 
Sbjct: 258 KLGKYDPSEASVDLDGQAMEQV---TDIERHGLKMAGLAVLVLGVILALTVVPEGAPLRH 314

Query: 299 PDGEITAFTAPIMKSIVPLIFLLFIIPGIVYGRVAGTFKNSNDVIKAMSATMSTMGAYIV 358
           PD  + A  +P +K IV  IF+ F IPG+VYG+V GT K   DVI AMS +M TMG YIV
Sbjct: 315 PDTGLVA-GSPFLKGIVVFIFICFAIPGLVYGKVVGTMKKDTDVINAMSHSMGTMGMYIV 373

Query: 359 MSFFCAQFLSAFGQSNIGTMLALYGAEGLKAMNLPGQATIVGMILLTAMVNLLVGSASAK 418
           + FF +QF++ F  +N+G +LA+ GA+ L A+ L G    +  I +   +NL++GSASA+
Sbjct: 374 LVFFASQFVAFFKWTNLGAVLAVMGADALSAIGLTGPLLFLLFIAMCGFINLMLGSASAQ 433

Query: 419 WALIGPILVPMLMAVGISPELSQAAYRVGDSVSNIISPLMVFFPLVVVYCQRYVKSTGIG 478
           WA+  PI VPMLM VG +PE  QAAYR+GDSV+N+I+P+M +F L++    RY K  GIG
Sbjct: 434 WAVTAPIFVPMLMLVGYAPETIQAAYRIGDSVTNLITPMMSYFGLILAVACRYKKDMGIG 493

Query: 479 TLASMMMPYSIAMLIGW-SLFLLVYWALGIPLGIQAPYTYT 518
           TL + M+PY++   +GW S F L  +  G+P+G  A   YT
Sbjct: 494 TLVATMLPYTLVFFVGWTSFFFLWVFGFGLPVGPGAATYYT 534