Pairwise Alignments

Query, 184 a.a., general secretion pathway protein GspH from Vibrio cholerae E7946 ATCC 55056

Subject, 166 a.a., type IV pilus biogenesis protein from Pseudomonas syringae pv. syringae B728a

 Score = 48.9 bits (115), Expect = 5e-11
 Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 5/157 (3%)

Query: 16  HRGFTLLELLITVAVLTTMLLFAAPNFSKVSQQTKMTNLANELQGFLIQAKSEAVFRNQD 75
           H GFTL+ELLI VA++  +   A P+F ++   ++    A EL   +  A++ AV RNQ 
Sbjct: 3   HAGFTLIELLIVVALVAILANVATPSFKELIDSSRGLATARELASGIRSARAAAVTRNQI 62

Query: 76  LWVHIQGLPSITGQWQLVLSSVSDVAAIDASNTVALLQGQRYQNVFVSKTNTLTEVKFDH 135
           + +H        G W+++L   +D    D ++ V + +        V     + E+ F+ 
Sbjct: 63  VTLHAIENDWSNG-WRIILD--ADGKGPDENDPVLIERANSSTARVVDNRKRVEEISFNG 119

Query: 136 V-MGNPQEAGSLFIKPSESAADSIKVTVHNRAGRIKV 171
           +     + A +L +  ++    + +V V   AGR++V
Sbjct: 120 LGTLRRRTARTLHVCAADQPVSNYRVIV-APAGRVRV 155