Pairwise Alignments

Query, 147 a.a., prepilin-type cleavage/methylation domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 130 a.a., type IV pilus biogenesis protein PilE (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 67.8 bits (164), Expect = 6e-17
 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 10/135 (7%)

Query: 15  QQQGMTLIELMIAVVIVGVLASIAYPAYTNYVKEGHRKQAMADMAKIQLYLEEKY-QNGY 73
           + +G TLIE+MI VVI+G+L++IAYP+YT YV +  R + ++ + K+    E+ Y  N  
Sbjct: 4   KDKGFTLIEVMIVVVIIGILSAIAYPSYTRYVAQSTRAEGLSALMKLANLQEQYYLDNRK 63

Query: 74  TATGIVDAQKVCNSFCSVDSDRYKIVVETAATSYAITATPQSSKGQNSDQCDGSAYTSLT 133
            AT   D  K+ N+   +  +    V  +  +S+ + A  +  +      C     + LT
Sbjct: 64  YAT---DLTKIINADPYITENGNYSVTSSGTSSFTLKAVAKGVQASRDSSC-----SPLT 115

Query: 134 LNEKGVTSPIG-CWK 147
           + + G   P   CWK
Sbjct: 116 ITDTGAKGPSAECWK 130