Pairwise Alignments

Query, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., DnaJ-class molecular chaperone CbpA from Xanthomonas campestris pv. campestris strain 8004

 Score =  162 bits (410), Expect = 1e-44
 Identities = 129/368 (35%), Positives = 165/368 (44%), Gaps = 89/368 (24%)

Query: 1   MSKRDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDA 60
           M  +D+Y  LGV   A E +IK AY+RLA KYHPD  S +AGA +KFK + EAYE L D 
Sbjct: 1   MEFKDYYATLGVEPSAGEAEIKTAYRRLARKYHPDV-SKEAGAEDKFKAINEAYEALRDP 59

Query: 61  QKKAAYDQYGHAAFEQG-----AGGFGGGG-------FGGGGADFGDIFGDVFGDIFGGG 108
           QK+AAYDQ     +  G        F GG        FG GGA  G  F D F  +F G 
Sbjct: 60  QKRAAYDQLKAQGYRPGDEFQTPPNFNGGQGFDYEEVFGNGGAGGG--FSDFFESLFAG- 116

Query: 109 RRGGGPRAQRGSDLRYNMELSLEEAVRGCSKEIEVPTLVHCDACDGSGAKKGTSAQTCGT 168
           +RGG PR                                      G GA  G  AQT G 
Sbjct: 117 QRGGRPR--------------------------------------GPGAGAGPGAQTRGD 138

Query: 169 CHGHGQVQMRQGFFAVQQTCPTCHGKGKIIKDPCNVCHGQGRKQKTKTLNVKIPAGVDTG 228
                 V + +  ++      T  GK                      L+V++P G+  G
Sbjct: 139 TRAKLAVPL-EAVYSGDSVRITITGK---------------------QLDVRVPKGIQPG 176

Query: 229 DRIRLSGEGEAGEMGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSFAMAALGGEVEVP 288
             IRLSG+G  G      G+L +++    H  FE DG N+   + V    AALG  + VP
Sbjct: 177 QVIRLSGQGNGG------GNLLLEIEHAAHPQFEVDGRNILYTLQVMPWQAALGTTISVP 230

Query: 289 TLDGRVSLKVPAETQTGRMFRMRGKGVKGVRSAALGDLIVKLVVETPVNLSARQKE---- 344
           TL G V LKVPA+++ GR  R+RG+G+ G   A  GD IV+L +  P      QK+    
Sbjct: 231 TLGGAVELKVPADSEAGRKLRLRGRGLPG---ATPGDQIVELEILAPAPTDEAQKKAYRT 287

Query: 345 LLKEFEES 352
           L K F ES
Sbjct: 288 LAKAFGES 295