Pairwise Alignments

Query, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., Heat shock protein DnaJ-like from Synechococcus elongatus PCC 7942

 Score =  142 bits (359), Expect = 9e-39
 Identities = 109/354 (30%), Positives = 165/354 (46%), Gaps = 77/354 (21%)

Query: 4   RDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQKK 63
           RD+Y +LG+ + A +  IK A+++LA + HPD N GD  A E+FK++ EAYEIL+D  ++
Sbjct: 12  RDYYALLGIPQSADQAAIKAAFRKLARQCHPDLNPGDRQAEERFKQISEAYEILSDPDRR 71

Query: 64  AAYDQYGHAAFEQGAGGFGGGGFGGGGADFGDIFGDVFG--DIFGGGRRGGGPRAQRGSD 121
           A Y ++     +QGA   G     G   DF     ++ G   +    RR     A   S 
Sbjct: 72  AEYQRFSRYWQQQGAASVGSDDDYGDFPDFDIFVDELLGRRTVERSPRRSARRSAATSSA 131

Query: 122 LRYNMELSLEEAVRGCSKEIEVPTLVHCDACDGSGAKKGTSAQTCGTCHGHGQVQMRQGF 181
           L  ++E SLE                     D   A +G SAQ          +Q+  G 
Sbjct: 132 LSRDLERSLE--------------------VDPKTALQGGSAQ----------LQLEDG- 160

Query: 182 FAVQQTCPTCHGKGKIIKDPCNVCHGQGRKQKTKTLNVKIPAGVDTGDRIRLSGEGEAGE 241
                                            + L V IPAG+  G+ +RL G+G  G 
Sbjct: 161 ---------------------------------RLLEVDIPAGIQAGEYLRLRGQGIKG- 186

Query: 242 MGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSFAMAALGGEVEVPTLDGRVSLKVPAE 301
                GDL ++V ++  + F+  G+++   + VS AMA LGG+V VPTLDG V +K+PA 
Sbjct: 187 -----GDLLLRVQLQASN-FQVQGSDVIYTLNVSPAMAVLGGQVTVPTLDGPVQMKLPAS 240

Query: 302 TQTGRMFRMRGKGVKGVRSAALGDLIVKLVVETPVNLSARQKEL---LKEFEES 352
            ++G+  R+ GKG     S   GD IV + ++ P  LS  +++L   L+  E+S
Sbjct: 241 LRSGQRLRLAGKGY-SKPSGDRGDQIVVIQLQLPTRLSPEERQLYEQLRSLEQS 293