Pairwise Alignments

Query, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., chaperone protein from Sinorhizobium meliloti 1021

 Score = 60.1 bits (144), Expect = 9e-14
 Identities = 28/64 (43%), Positives = 39/64 (60%)

Query: 4  RDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQKK 63
          RD Y +LGV R A + +IK A++ +A   HPD N  D  A E+F E   AYE+L D  ++
Sbjct: 6  RDPYAILGVRRTAGQEEIKAAWRSVARAVHPDHNQDDPTANERFAEAGRAYELLRDPVRR 65

Query: 64 AAYD 67
          + YD
Sbjct: 66 SRYD 69



 Score = 57.8 bits (138), Expect = 5e-13
 Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 2/135 (1%)

Query: 198 IKDPCNVCHGQGRKQKTKTLNVKIPAGVDTGDRIRLSGEGEAGEMGAPAGDLYVQVHVKE 257
           ++D  N+          + L V IPAG   G  IRL  +G     G   GD+   + + +
Sbjct: 196 VEDVINLARVPVELPDGELLKVPIPAGATDGQAIRLKEQGYR-VAGMARGDVVATLRLSQ 254

Query: 258 HHIFERDGNNLYCEVPVSFAMAALGGEVEVPTLDGRVSLKVPAETQTGRMFRMRGKGVKG 317
              F   G ++   +P+    A LG E  +   +G +++ VPA + + +  R+ GKG++G
Sbjct: 255 DGPFRTRGLDIVTTLPIDLQNAVLGCETTIEAPNGPLTVAVPAWSGSDKEIRIAGKGLRG 314

Query: 318 VRSAALGDLIVKLVV 332
               + GDLIV+L V
Sbjct: 315 ADGES-GDLIVELRV 328



 Score = 29.3 bits (64), Expect = 2e-04
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 113 GPRAQRGSDLRYNMELSLEEAVRGCSKEIEVP 144
           GP   RG D+   + + L+ AV GC   IE P
Sbjct: 256 GPFRTRGLDIVTTLPIDLQNAVLGCETTIEAP 287