Pairwise Alignments

Query, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., DnaJ/CbpA-type protein from Sinorhizobium meliloti 1021

 Score =  102 bits (254), Expect = 1e-26
 Identities = 50/120 (41%), Positives = 74/120 (61%), Gaps = 1/120 (0%)

Query: 216 TLNVKIPAGVDTGDRIRLSGEGEAGEMGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVS 275
           TL++ IPAG   G  +RL G+G  G  G   GD  +++ V+ H +F R+GN++  ++P++
Sbjct: 157 TLDLAIPAGTRDGSTLRLRGKGTPGIAGGEPGDALIEISVRSHSVFRREGNDIEIDLPIT 216

Query: 276 FAMAALGGEVEVPTLDGRVSLKVPAETQTGRMFRMRGKGVKGVRSAALGDLIVKLVVETP 335
              A LG ++EVPT+ GRVS+ +P  + TG + R+RGKGVK     A GD  V L V  P
Sbjct: 217 LYEAVLGAKIEVPTISGRVSMTIPKGSNTGDILRLRGKGVKSQHGPA-GDQRVTLKVVLP 275



 Score =  102 bits (253), Expect = 2e-26
 Identities = 84/277 (30%), Positives = 129/277 (46%), Gaps = 34/277 (12%)

Query: 5   DFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQKKA 64
           D Y++LGV R     +I+KAY++ A + HPD + GD     KFK +  AY +L+D +++A
Sbjct: 4   DPYQILGVPRTGKPDEIRKAYRKRAKELHPDLHPGDKEVETKFKALSAAYHLLSDPEQRA 63

Query: 65  AYDQ---------------YGHAAFEQGAGGFGGGGFGGGGADFGDIFGDVFGDIFGGGR 109
            +D+               Y H A    A  +G     GG  +F D+  D+F D+FG G 
Sbjct: 64  RFDRGEIDASGAERPQQHFYRHYADADHARRYGS---AGGTGEFEDV-SDIFADLFGQGG 119

Query: 110 RGGGPRAQRGSDLRYNMELSLEEAVRGCSKEIEVPTLVHCDACDGSGAKKGTSAQTCGTC 169
            GG  +A RG D  Y++EL   +AV G  + I  P     D    +G + G++ +  G  
Sbjct: 120 AGGRFKA-RGQDRHYHLELEFLDAVNGARRRITFPDGNTLDLAIPAGTRDGSTLRLRG-- 176

Query: 170 HGHGQVQMRQGFFAVQQTCPTCH------GKGKIIKDPCNVCHG-QGRKQKTKTL----N 218
            G   +   +   A+ +     H      G    I  P  +     G K +  T+    +
Sbjct: 177 KGTPGIAGGEPGDALIEISVRSHSVFRREGNDIEIDLPITLYEAVLGAKIEVPTISGRVS 236

Query: 219 VKIPAGVDTGDRIRLSGEGEAGEMGAPAGDLYVQVHV 255
           + IP G +TGD +RL G+G   + G PAGD  V + V
Sbjct: 237 MTIPKGSNTGDILRLRGKGVKSQHG-PAGDQRVTLKV 272