Pairwise Alignments

Query, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., chaperone protein DnaJ (RefSeq) from Shewanella amazonensis SB2B

 Score =  623 bits (1607), Expect = 0.0
 Identities = 306/381 (80%), Positives = 336/381 (88%), Gaps = 5/381 (1%)

Query: 1   MSKRDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDA 60
           MSKRD+YEVLGVGRDASER+IKKAYKRLAMKYHPDRN GD  A   FKEVKEAYEILTD 
Sbjct: 1   MSKRDYYEVLGVGRDASEREIKKAYKRLAMKYHPDRNPGDKEAEASFKEVKEAYEILTDT 60

Query: 61  QKKAAYDQYGHAAFEQGAGGFGGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGPRAQRGS 120
            KKAAYDQ+GHA  +   GG   GGFGGGG DFGDIFGDVFGDIFGGGRRGG  +A RGS
Sbjct: 61  DKKAAYDQFGHAGVDPNRGG---GGFGGGG-DFGDIFGDVFGDIFGGGRRGGQRQAARGS 116

Query: 121 DLRYNMELSLEEAVRGCSKEIEVPTLVHCDACDGSGAKKGTSAQTCGTCHGHGQVQMRQG 180
           DLRYN+ELSLEEAVRG +KE++VPTLV CD+CDGSGAKKG+SA TCGTCHG GQVQMRQG
Sbjct: 117 DLRYNLELSLEEAVRGLTKELKVPTLVGCDSCDGSGAKKGSSATTCGTCHGMGQVQMRQG 176

Query: 181 FFAVQQTCPTCHGKGKIIKDPCNVCHGQGRKQKTKTLNVKIPAGVDTGDRIRLSGEGEAG 240
           FFAVQQTCPTCHG+GKIIKDPC+ CHG GR +KTKTL+VKIPAGVDTGDRIRL+GEGEAG
Sbjct: 177 FFAVQQTCPTCHGRGKIIKDPCSKCHGNGRVEKTKTLSVKIPAGVDTGDRIRLAGEGEAG 236

Query: 241 EMGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSFAMAALGGEVEVPTLDGRVSLKVPA 300
           E GAP GDLYVQV V+EH IF RDGNNLYCEVP+SFA AALGGE+EVPTLDG+VSLK+PA
Sbjct: 237 EFGAPPGDLYVQVTVREHPIFVRDGNNLYCEVPISFAKAALGGEIEVPTLDGKVSLKIPA 296

Query: 301 ETQTGRMFRMRGKGVKGVRSAALGDLIVKLVVETPVNLSARQKELLKEFEESCGGEAATK 360
           ETQTGRMFR+RGKGVK VRS A+GDL+ K+V+ETPVNLS RQKELL+EFE S  GE + K
Sbjct: 297 ETQTGRMFRLRGKGVKSVRSHAVGDLLCKVVMETPVNLSERQKELLREFEASLTGE-SKK 355

Query: 361 HKPKAEGFFNGVKKFFDDLTS 381
           H PKAEGFF+GVKKFF DL +
Sbjct: 356 HSPKAEGFFDGVKKFFQDLNN 376