Pairwise Alignments

Query, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., Heat shock protein DnaJ (NCBI) from Rhodospirillum rubrum S1H

 Score =  449 bits (1155), Expect = e-131
 Identities = 217/380 (57%), Positives = 280/380 (73%), Gaps = 5/380 (1%)

Query: 1   MSKRDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDA 60
           M+KRDFYEVLGV + AS  +IKK+Y+ LAM+YHPDRN  DA A   F+EV  AYE+L D 
Sbjct: 11  MTKRDFYEVLGVSKGASNDEIKKSYRTLAMRYHPDRNPNDAEAEANFREVNTAYEVLKDE 70

Query: 61  QKKAAYDQYGHAAFEQGAGGFGGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGPRAQRGS 120
           QK+AAYD++GHAAFEQ   G G G FG G A F DIF ++FG+  GGGRRGG   A RG+
Sbjct: 71  QKRAAYDRFGHAAFEQAGAGRGAGDFGFG-AGFADIFDEMFGEFMGGGRRGGST-AMRGA 128

Query: 121 DLRYNMELSLEEAVRGCSKEIEVPTLVHCDACDGSGAKKGTSAQTCGTCHGHGQVQMRQG 180
           DLRYNME+SLEEA  G    + VPT V C++C GSG+K G +   C TCHG G+V+ +QG
Sbjct: 129 DLRYNMEISLEEAFAGKKTTVHVPTSVSCESCRGSGSKGGAAPDGCPTCHGSGRVRAQQG 188

Query: 181 FFAVQQTCPTCHGKGKIIKDPCNVCHGQGRKQKTKTLNVKIPAGVDTGDRIRLSGEGEAG 240
           FF +++TCPTCHG+GK+I+DPC  C G GR+++ KTL V IPAGV+ G RIRL+GEGEAG
Sbjct: 189 FFTIERTCPTCHGQGKVIRDPCPDCAGSGRQRREKTLEVTIPAGVEEGTRIRLAGEGEAG 248

Query: 241 EMGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSFAMAALGGEVEVPTLD-GRVSLKVP 299
             GAP+GDLY+ + +  H IF RDG N+ C+VP+    AALGG +EVPT+D GR ++ +P
Sbjct: 249 LRGAPSGDLYIFLTIAPHRIFLRDGANIACKVPIPMTTAALGGTIEVPTIDGGRAAVTIP 308

Query: 300 AETQTGRMFRMRGKGVKGVRSAALGDLIVKLVVETPVNLSARQKELLKEFEESCGGEAAT 359
             TQTG  FR+R KG+  +RSA+ GD+ V  VVETPVNL+ RQ+ELL+EFEE+  G+  T
Sbjct: 309 QGTQTGNQFRLRSKGMSVLRSASRGDMFVHAVVETPVNLTKRQEELLREFEEA--GDKDT 366

Query: 360 KHKPKAEGFFNGVKKFFDDL 379
            H P++  FF  VK+F++D+
Sbjct: 367 AHSPESSSFFKKVKEFWEDI 386