Pairwise Alignments

Query, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., DnaJ-class molecular chaperone from Caulobacter crescentus NA1000

 Score =  136 bits (342), Expect = 9e-37
 Identities = 109/340 (32%), Positives = 158/340 (46%), Gaps = 61/340 (17%)

Query: 4   RDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQKK 63
           RD Y+ LGV R AS  +I+KA+++LA +YHPD N GD  A E+FK+V  A++I+ DA+K+
Sbjct: 3   RDPYQELGVTRTASADEIRKAFRKLAKQYHPDANPGDKKAEERFKQVSAAFDIVGDAEKR 62

Query: 64  AAYDQYG-HAAFEQGAGGFGGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGPRAQRGSDL 122
             +D     A   +   GFGG     G   F            GG  +GG  R+  G   
Sbjct: 63  KKFDLGQIDADGRETMRGFGGQP---GNGPFNA----------GGFGQGGFHRSNEGP-- 107

Query: 123 RYNMELSLEEAVRGCSKEIEVPTLVHCDACDGSGAKKGTSAQTCGTCHGHGQVQMRQGFF 182
               E+ L +   G                 G G   G          G G         
Sbjct: 108 ----EIDLSDLFGGMF---------------GGGGPGGAGRGPFSGGAGGGF-------- 140

Query: 183 AVQQTCPTCHGKGKIIKDPCNVCHGQGRKQKT----KTLNVKIPAGVDTGDRIRLSGEGE 238
               +      K ++  D  +   G G+K+      +T++V IP G   G  +RL G+G 
Sbjct: 141 ----SAKGADVKARLDIDLEDAIKG-GKKRVAFSDGRTIDVTIPTGAQEGQTLRLKGQGS 195

Query: 239 AGEMGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSFAMAALGGEVEVPTLDGRVSLKV 298
            G  G   GD  +++ +K H I+ R+G  L  ++PVS   A LGG+VE PT DG V L V
Sbjct: 196 PGRGGQ--GDALIELAIKPHPIYRREGEALVMDLPVSIPDAVLGGKVEAPTPDGNVMLAV 253

Query: 299 PAETQTGRMFRMRGKGV---KGVRSAALGDLIVKLVVETP 335
           P  + +G+  R++G+G+   KG R    GDL+ +LVV  P
Sbjct: 254 PKGSNSGQTLRLKGRGMPDGKGKR----GDLLARLVVTLP 289