Pairwise Alignments

Query, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., chaperone protein DnaJ from Caulobacter crescentus NA1000

 Score =  399 bits (1026), Expect = e-116
 Identities = 196/388 (50%), Positives = 263/388 (67%), Gaps = 17/388 (4%)

Query: 4   RDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDAQKK 63
           RD+YE+LGV R   E  +K A+++LAM++HPDRN G   AA +FKE+ EAY +L+D QK+
Sbjct: 2   RDYYEILGVTRTIDEAGLKSAFRKLAMEHHPDRNGGCENAAGRFKEINEAYSVLSDPQKR 61

Query: 64  AAYDQYGHAAF---EQGAGGFGGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGPRAQRGS 120
           AAYD++GHA     + G GGFGG GF      F D+FGDVFG++FGGGRR      QRG 
Sbjct: 62  AAYDRFGHAGVNGPQGGPGGFGGQGFDASDI-FNDVFGDVFGEMFGGGRRQSNA-PQRGQ 119

Query: 121 DLRYNMELSLEEAVRGCSKEIEVPTLVHCDACDGSGAKKGTSAQTCGTCHGHGQVQMRQG 180
           DLRY++E++LE+A  G   EI VP  + C+ C+GSGAK GTS   CGTC G G+V+  QG
Sbjct: 120 DLRYDLEITLEQAYAGAEVEITVPAAMTCEVCEGSGAKPGTSPSVCGTCGGAGRVRATQG 179

Query: 181 FFAVQQTCPTCHGKGKIIKDPCNVCHGQGRKQKTKTLNVKIPAGVDTGDRIRLSGEGEAG 240
           FFAV++ CP C G G+++ DPC+ CHG G+ ++ + L+V+IPAGVD G RIRL+GEG+AG
Sbjct: 180 FFAVERGCPRCGGSGRLVLDPCSNCHGHGQVRRERILSVRIPAGVDDGARIRLAGEGDAG 239

Query: 241 EMGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSFAMAALGGEVEVPTLDG-------- 292
             G P GDLY+ + V  H +FERDG +L C VPV    AALGGE++ P L G        
Sbjct: 240 ARGGPRGDLYIFLSVTPHELFERDGLDLLCTVPVPMTTAALGGEIDAPCLLGGESCDGEC 299

Query: 293 RVSLKVPAETQTGRMFRMRGKGVKGVRSAALGDLIVKLVVETPVNLSARQKELLKEFEES 352
           +V + VP   QTG+  R++GKG+  +RS   GDL+V+L VETP +LSARQKEL++E    
Sbjct: 300 KVKVHVPEGAQTGKTVRLKGKGMPSLRSRQRGDLVVELFVETPTHLSARQKELMRELAGL 359

Query: 353 CGGEAATKHKPKAEGFFNGVKKFFDDLT 380
           CG     K  PK+  F    K+F++++T
Sbjct: 360 CG----EKQNPKSANFVGKAKRFWEEVT 383