Pairwise Alignments

Query, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., putative chaperone DnAJ (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  186 bits (472), Expect = 8e-52
 Identities = 136/387 (35%), Positives = 177/387 (45%), Gaps = 106/387 (27%)

Query: 1   MSKRDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDA 60
           M+  D+Y++LGV + AS+ DIKKA+++LA KYHPD N  D  A +KF+E+ EA E+L+D 
Sbjct: 1   MAYIDYYKILGVDKSASQDDIKKAFRKLARKYHPDLNPNDPSAKDKFQEINEANEVLSDP 60

Query: 61  QKKAAYDQYG----HA-AFE------QGAGGFGG----GGFGGGGADFGD---------- 95
           +K+  YD+YG    HA  FE      Q AGGFGG    GGFGGGG  F D          
Sbjct: 61  EKRKKYDEYGEHWKHADEFEAQKKARQQAGGFGGAGGFGGFGGGGQGFSDGDGTYWYSSD 120

Query: 96  -----------IFGDVFGDIFGGGRRGGGPRAQRGSDLRYNMELSLEEAVRGCSKEIEVP 144
                       F D F  +FG   RG      RG D    + LSL +A           
Sbjct: 121 GGKGFSGGNAGGFSDFFESMFGHRGRGQSSAGFRGQDFNAELHLSLRDA----------- 169

Query: 145 TLVHCDACDGSGAKKGTSAQTCGTCHGHGQVQMRQGFFAVQQTCPTCHGKGKIIKDPCNV 204
                             AQT      H Q+              T +GK   I  P  V
Sbjct: 170 ------------------AQT------HKQIL-------------TVNGKQVRITIPAGV 192

Query: 205 CHGQGRKQKTKTLNVKIPAGVDTGDRIRLSGEGEAGEMGAPAGDLYVQVHVKEHHIFERD 264
             GQ                      I+L G G  G  G PAGDLY+   + E  +F+R 
Sbjct: 193 ADGQ---------------------VIKLKGYGAEGVNGGPAGDLYITFVIAEDPVFKRL 231

Query: 265 GNNLYCEVPVSFAMAALGGEVEVPTLDGRVSLKVPAETQTGRMFRMRGKGVKGV-RSAAL 323
           G++LY +V V    A LGG+  V TLDG+V LK+  ETQ G   R++GKG     +    
Sbjct: 232 GDDLYVDVEVDLYTAVLGGDKVVDTLDGKVKLKIKPETQNGTKVRLKGKGFPVYKKEGQF 291

Query: 324 GDLIVKLVVETPVNLSARQKELLKEFE 350
           GDLIV   V+ P NL+  QKEL ++ +
Sbjct: 292 GDLIVTYSVKIPTNLTEAQKELFRQLQ 318