Pairwise Alignments

Query, 381 a.a., molecular chaperone DnaJ from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., chaperone protein DnaJ (RefSeq) from Shewanella sp. ANA-3

 Score =  614 bits (1584), Expect = e-180
 Identities = 298/381 (78%), Positives = 332/381 (87%), Gaps = 4/381 (1%)

Query: 1   MSKRDFYEVLGVGRDASERDIKKAYKRLAMKYHPDRNSGDAGAAEKFKEVKEAYEILTDA 60
           MSKRD+YEVLGVGRDASER+IKKAYKRLAMK+HPDRN GD  A   FKEVKEAYEILTDA
Sbjct: 1   MSKRDYYEVLGVGRDASEREIKKAYKRLAMKFHPDRNPGDKAAEASFKEVKEAYEILTDA 60

Query: 61  QKKAAYDQYGHAAFEQGAGGFGGGGFGGGGADFGDIFGDVFGDIFGGGRRGGGPRAQRGS 120
            KKAAYDQ+GHA  +   GG  GGG+GG G DFGDIFGDVFGDIFGGGRRGG  +A RGS
Sbjct: 61  NKKAAYDQFGHAGVDPNRGG--GGGYGGAG-DFGDIFGDVFGDIFGGGRRGGQRQAARGS 117

Query: 121 DLRYNMELSLEEAVRGCSKEIEVPTLVHCDACDGSGAKKGTSAQTCGTCHGHGQVQMRQG 180
           DLRYN+ELSLEEAV+G +KE+ +PTL  CD CDGSGAKKG+SA TCGTCHG GQVQMRQG
Sbjct: 118 DLRYNLELSLEEAVKGLTKELRIPTLASCDVCDGSGAKKGSSATTCGTCHGQGQVQMRQG 177

Query: 181 FFAVQQTCPTCHGKGKIIKDPCNVCHGQGRKQKTKTLNVKIPAGVDTGDRIRLSGEGEAG 240
           FF VQQ CPTCHG+GKIIKDPC+ CHG GR +KTKTL+VKIPAGVDTGDRIRL+GEGEAG
Sbjct: 178 FFTVQQPCPTCHGRGKIIKDPCSKCHGDGRVEKTKTLSVKIPAGVDTGDRIRLAGEGEAG 237

Query: 241 EMGAPAGDLYVQVHVKEHHIFERDGNNLYCEVPVSFAMAALGGEVEVPTLDGRVSLKVPA 300
           E GAP GDLYVQV V+EH IF RDGNNLYCEVP+SF+ AALGGE+EVPTLDG+VSLK+PA
Sbjct: 238 EFGAPPGDLYVQVTVREHAIFVRDGNNLYCEVPISFSKAALGGEIEVPTLDGKVSLKIPA 297

Query: 301 ETQTGRMFRMRGKGVKGVRSAALGDLIVKLVVETPVNLSARQKELLKEFEESCGGEAATK 360
           ETQTGRMFR+RGKGVK VRS A+GDL+ K+V+ETPVNL+ RQKELL+EFE +  GE + K
Sbjct: 298 ETQTGRMFRLRGKGVKSVRSHAVGDLLCKVVMETPVNLNERQKELLREFEATLTGE-SKK 356

Query: 361 HKPKAEGFFNGVKKFFDDLTS 381
           H PKAEGFF+GVKKFF DL S
Sbjct: 357 HSPKAEGFFDGVKKFFQDLNS 377