Pairwise Alignments

Query, 635 a.a., molecular chaperone DnaK from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., Chaperone protein HscA from Pseudomonas fluorescens FW300-N2E2

 Score =  416 bits (1070), Expect = e-120
 Identities = 245/590 (41%), Positives = 362/590 (61%), Gaps = 25/590 (4%)

Query: 5   IGIDLGTTNSCVAVLDGDKPRVIENAEGERTTPSVIAYTDGETLVGQPAKRQAVTNPQNT 64
           +GIDLGTTNS VA L       + + +G    PS + Y      VG+ AK  A T+P NT
Sbjct: 22  VGIDLGTTNSLVAALRSGLSEPLADEQGRVILPSAVRYHADHVEVGESAKLAAATDPLNT 81

Query: 65  LFAIKRLIGRRFEDEEVQRDIKIMPYKIVKADNGDAWVEAKGQKMAAPQVSAEVLKKMKK 124
           + ++KRL+GR   D +   D   +PY+ V  ++   ++E      +  +VSA++LK +++
Sbjct: 82  IVSVKRLMGRGLSDVKQLGDQ--LPYRFVGGESHMPFIETVQGPKSPVEVSADILKVLRQ 139

Query: 125 TAEDFLGEPVTAAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKQG 184
            AE  LG  +  AVITVPAYF+DAQRQATKDA ++AGL V R++NEPTAAA+AYGLD Q 
Sbjct: 140 RAEAALGGELVGAVITVPAYFDDAQRQATKDAAKLAGLNVLRLLNEPTAAAVAYGLD-QH 198

Query: 185 GDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLSTNGDTHLGGEDFDNRMINYLVDEFK 244
            +  +A+YDLGGGTFDISI+ +        FEVL+T GD+ LGG+DFD+ +  +++++  
Sbjct: 199 AEGLVAIYDLGGGTFDISILRLTG----GVFEVLATGGDSALGGDDFDHAIAGWIIEQ-- 252

Query: 245 KDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKL 304
              G+    DP A + L + A  AK  L+ A   +V   Y    AT        ++R   
Sbjct: 253 --AGLSADLDPGAQRHLLQTACAAKEALTDAATVEV--AYGDWKAT--------LSREAF 300

Query: 305 EALVEDLVQRSLEPLKVALADADLSVNDITDVILVGGQTRMPMVQKKVAEFFGKEPRKDV 364
           +AL+E +V RSL+  + A+ D+ + + D+  V++VGG TR+P V++ VAE FG++P  ++
Sbjct: 301 DALIEPMVARSLKACRRAVRDSGVELEDVKAVVMVGGSTRVPRVREAVAEAFGRQPLTEI 360

Query: 365 NPDEAVAVGAAVQGGVLAGEVKD---VLLLDVTPLSLGIETMGGVMTKLIEKNTTIPTKA 421
           +PD+ VA+GAA+Q   LAG  +D   +LLLDV PLSLG+ETMGG+M K+I +NTTIP   
Sbjct: 361 DPDQVVAIGAAIQADTLAGNKRDGGELLLLDVIPLSLGLETMGGLMEKVIPRNTTIPVAR 420

Query: 422 NQVFSTAEDNQSAVTIHVLQGERKQAMYNKSLGQFNLEGINPAPRGMPQIEVIFDLDADG 481
            Q F+T +D QSA+ +HVLQGER+     +SL +F L GI P   G  +I V F +DADG
Sbjct: 421 AQDFTTYKDGQSAMMVHVLQGERELISDCRSLARFELRGIPPMVAGAAKIRVTFQVDADG 480

Query: 482 ILHVSAKDKQTGKEQKITIQASGGLSDAEIEKMVQEAEANKEADKKFEELATARNQADQM 541
           +L+VSA++  +G E  I ++ S GL+D EI KM++++  +   DK    L   +  A ++
Sbjct: 481 LLNVSARELGSGVEASIQVKPSYGLTDGEIAKMLKDSFQHASDDKVARVLREQQVDAQRL 540

Query: 542 IHATRKQITEAGE-ALPADEKAKIETAINELETAKKGEDKAEIDAKVQAL 590
           I A +  +   G+  L A+E+  IE  + EL    KG D   I+ + + L
Sbjct: 541 IEAVQGALEADGDRLLDAEERMVIELQMQELSELIKGTDGYAIEQQTKRL 590