Pairwise Alignments

Query, 635 a.a., molecular chaperone DnaK from Vibrio cholerae E7946 ATCC 55056

Subject, 619 a.a., chaperone protein HscA (RefSeq) from Shewanella amazonensis SB2B

 Score =  408 bits (1048), Expect = e-118
 Identities = 238/620 (38%), Positives = 365/620 (58%), Gaps = 27/620 (4%)

Query: 5   IGIDLGTTNSCVAVLDGDKPRVIENAEGERTTPSVIAYTDGETLVGQPAKRQAVTNPQNT 64
           +GIDLGTTNS VA +   + R + +A+G  + PS++ Y      VGQ A+  + T+  NT
Sbjct: 22  VGIDLGTTNSLVAAVRSGEARTLADAQGRHSLPSIVRYAKEGISVGQEAELHSATDAANT 81

Query: 65  LFAIKRLIGRRFEDEEVQRDIKIMPYKIVKADNGDAWVEAKGQKMAAPQVSAEVLKKMKK 124
           + ++KR +GR   D  ++   +  PY+   ++NG         ++   QVSAE+L+ +  
Sbjct: 82  IVSVKRFMGRSLAD--IEAGSQRFPYQFSASENGLPLFNTPQGQVNPVQVSAEILRPLIA 139

Query: 125 TAEDFLGEPVTAAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKQG 184
            AED LG  +  AVITVPAYF+DAQRQ TKDA ++ G++V R++NEPTAAA+AYGLD  G
Sbjct: 140 RAEDTLGGSLEGAVITVPAYFDDAQRQGTKDAAQLLGVKVLRLLNEPTAAAIAYGLDS-G 198

Query: 185 GDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLSTNGDTHLGGEDFDNRMINYLVDEFK 244
            +  IAVYDLGGGTFDISI+ ++       FEVL+T GD+ LGG+DFD+ +  YL  ++ 
Sbjct: 199 QEGVIAVYDLGGGTFDISILRLNR----GVFEVLATGGDSALGGDDFDHLLGGYLAQQW- 253

Query: 245 KDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKL 304
              G+DL +  L  + + EA  + K  L+        L Y      G  + +  + R   
Sbjct: 254 ---GLDLADTGLGRKLMIEA-RRVKEALTETDTVTATLEY-----QGQAYHH-DIDRGTF 303

Query: 305 EALVEDLVQRSLEPLKVALADADLSVNDITDVILVGGQTRMPMVQKKVAEFFGKEPRKDV 364
           +AL+  LV++++   + AL DA +   ++ + ++VGG TR+P+V+ +V  FFGK P   +
Sbjct: 304 DALIAALVKKTIAACRRALRDAGIDAGEVLETVMVGGSTRVPLVRSEVEAFFGKAPLTSI 363

Query: 365 NPDEAVAVGAAVQGGVLAGEV--KDVLLLDVTPLSLGIETMGGVMTKLIEKNTTIPTKAN 422
           +PD  VA+GAA+Q  +L G     D+LLLDV PLSLGIETMGG++ K++ +NTTIP    
Sbjct: 364 DPDRVVAIGAAIQADILVGNKPESDLLLLDVIPLSLGIETMGGLVEKIVSRNTTIPVARA 423

Query: 423 QVFSTAEDNQSAVTIHVLQGERKQAMYNKSLGQFNLEGINPAPRGMPQIEVIFDLDADGI 482
           Q F+T +D Q+A+  HV+QGER+     +SL +F L+GI P   G   I V F +DADG+
Sbjct: 424 QEFTTFKDGQTAMAFHVVQGERELVQDCRSLARFTLKGIPPLAAGAAHIRVTFQVDADGL 483

Query: 483 LHVSAKDKQTGKEQKITIQASGGLSDAEIEKMVQEAEANKEADKKFEELATARNQADQMI 542
           L V+A +K TG +  I ++ S GLSD EI  M++++  + + D     LA  + +A +++
Sbjct: 484 LSVTAMEKSTGVKSSIQVKPSFGLSDTEIATMLKDSMKHAKEDISRRMLAEQQVEAARVL 543

Query: 543 HATRKQITEAGEALPADEKAKIETAINELETAKKGEDKAEIDAKVQALMAAAQKLMEIAQ 602
            +    + +    L  +E   I  A+ EL    KG+D         A++AA ++L    Q
Sbjct: 544 ESLHSALAKDKVLLSEEELNDITAAMAELAEVAKGDD-------ADAILAAIERLDNQTQ 596

Query: 603 QQAQAQGANAGQSSAKEDDV 622
           + A  +  N+ +++ K   V
Sbjct: 597 EFAAKRMDNSIRNALKGQSV 616