Pairwise Alignments

Query, 635 a.a., molecular chaperone DnaK from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., chaperone protein HscA (RefSeq) from Shewanella loihica PV-4

 Score =  388 bits (997), Expect = e-112
 Identities = 225/596 (37%), Positives = 352/596 (59%), Gaps = 25/596 (4%)

Query: 5   IGIDLGTTNSCVAVLDGDKPRVIENAEGERTTPSVIAYTDGETLVGQPAKRQAVTNPQNT 64
           +GIDLGTTNS VA +       + +  G     SV+ Y++    VG  A+R +  +P NT
Sbjct: 22  VGIDLGTTNSLVAAVRSGVADTLADESGRHALASVVRYSEDGVQVGVDAERFSAQDPLNT 81

Query: 65  LFAIKRLIGRRFEDEEVQRDIKIMPYKIVKADNGDAWVEAKGQKMAAPQVSAEVLKKMKK 124
           + ++KR +GR   D  +Q     +PY    ++NG      +  +    Q+SA++L+ +  
Sbjct: 82  VVSVKRFMGRSLSD--IQAKDASLPYNFSASENGLPLFNTQAGQFNPIQISADILRPLVD 139

Query: 125 TAEDFLGEPVTAAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKQG 184
            AE  LG  +   VITVPAYF+DAQRQ TK+A  + G++V R++NEPTAAA+AYGLD  G
Sbjct: 140 RAEKTLGGSLEGVVITVPAYFDDAQRQGTKEAASLLGVKVLRLLNEPTAAAIAYGLDS-G 198

Query: 185 GDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLSTNGDTHLGGEDFDNRMINYLVDEFK 244
            +  IA+YDLGGGTFDISI+ +++      FEVL+T GD+ LGG+DFD+ +  +L + ++
Sbjct: 199 QEGVIAIYDLGGGTFDISILRLNK----GVFEVLATGGDSALGGDDFDHALAAHLQESWQ 254

Query: 245 KDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADAT---GPKHMNIKVTR 301
                       A +R     E  +++ +  +Q  V     TA  T   G  H  + V +
Sbjct: 255 L-------TSLTASERRALLIESRRVKEALTEQASV-----TASLTLEQGIVHEQV-VDK 301

Query: 302 AKLEALVEDLVQRSLEPLKVALADADLSVNDITDVILVGGQTRMPMVQKKVAEFFGKEPR 361
           A+ +AL+E LV++++   + AL DA +S +++ + ++VGG TR+P+V+++V  FFGK P 
Sbjct: 302 AQFDALIESLVKKTIASCRRALRDAAISNDEVLETVMVGGSTRVPLVRERVEGFFGKAPL 361

Query: 362 KDVNPDEAVAVGAAVQGGVLAGEV--KDVLLLDVTPLSLGIETMGGVMTKLIEKNTTIPT 419
             ++PD  VA+GAA+Q  +L G     D+LLLDV PLSLGIETMGG++ K++ +NTTIP 
Sbjct: 362 TSIDPDRVVAIGAAIQADILVGNKPESDLLLLDVIPLSLGIETMGGLVEKVVSRNTTIPV 421

Query: 420 KANQVFSTAEDNQSAVTIHVLQGERKQAMYNKSLGQFNLEGINPAPRGMPQIEVIFDLDA 479
              Q F+T +D Q+A+  HV+QGER+     +SL +F L+GI P   G   I V F +DA
Sbjct: 422 ARAQEFTTFKDGQTAMAFHVVQGERELVADCRSLARFTLKGIPPMAAGAAHIRVTFQVDA 481

Query: 480 DGILHVSAKDKQTGKEQKITIQASGGLSDAEIEKMVQEAEANKEADKKFEELATARNQAD 539
           DG+L V+A +K +G +  I ++ S GL+D EI  M++++ A+ + D +   LA  + +A 
Sbjct: 482 DGLLSVTAMEKSSGVQASIQVKPSFGLTDEEIGTMLKDSMAHAKEDIERRMLAEQQVEAA 541

Query: 540 QMIHATRKQITEAGEALPADEKAKIETAINELETAKKGEDKAEIDAKVQALMAAAQ 595
           +++ +    + + G+ L   E A I+  +  L       D   I+  + AL  A+Q
Sbjct: 542 RVLESLSAALAKDGDLLDEAEAATIQAGMANLAQVASQSDTDAIEKAIAALDDASQ 597