Pairwise Alignments

Query, 635 a.a., molecular chaperone DnaK from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., chaperone protein HscA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  397 bits (1019), Expect = e-114
 Identities = 232/589 (39%), Positives = 361/589 (61%), Gaps = 21/589 (3%)

Query: 5   IGIDLGTTNSCVAVLDGDKPRVIENAEGERTTPSVIAYTDGETLVGQPAKRQAVTNPQNT 64
           +GIDLGTTNS VA +       + +  G+ + PS++ YT     VG  A   +  +P+NT
Sbjct: 22  VGIDLGTTNSLVAAVRSGVTATLPDENGQHSLPSIVRYTQEGIEVGYVAAMSSAQDPKNT 81

Query: 65  LFAIKRLIGRRFEDEEVQRDIKIMPYKIVKADNGDAWVEAKGQKMAAPQVSAEVLKKMKK 124
           + ++KR +GR   D  +Q   +  PY+   ++NG          +   QVSAE+L+ + +
Sbjct: 82  IVSVKRFMGRSLTD--IQSGEQSFPYQFEASENGLPLFVTPQGLVNPVQVSAEILRPLIE 139

Query: 125 TAEDFLGEPVTAAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLD-KQ 183
            AE  LG  +  AVITVPAYF+DAQRQ TKDA  + G++V R++NEPTAAA+AYGLD KQ
Sbjct: 140 RAEKTLGGELQGAVITVPAYFDDAQRQGTKDAASLLGVKVLRLLNEPTAAAIAYGLDSKQ 199

Query: 184 GGDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLSTNGDTHLGGEDFDNRMINYLVDEF 243
            G   IA+YDLGGGTFDISI+ ++       FEVL+T GD+ LGG+DFD+ +  +++  +
Sbjct: 200 EG--VIAIYDLGGGTFDISILRLNR----GVFEVLATGGDSALGGDDFDHLLQAHMLQVW 253

Query: 244 KKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAK 303
              Q  D+ +  L+ Q L EA  + K  L+ A  T+ +L    AD +  K +   VT+A+
Sbjct: 254 ---QLTDI-DSQLSRQLLIEA-RRVKEALTYASDTEASLTL--ADGSVLKQV---VTKAQ 303

Query: 304 LEALVEDLVQRSLEPLKVALADADLSVNDITDVILVGGQTRMPMVQKKVAEFFGKEPRKD 363
            E L+  LV++++   +  L DA ++ +++ + ++VGG TR+P+V+++V  FFGK P   
Sbjct: 304 FEGLIAALVKKTIASCRRTLRDAGVTADEVLETVMVGGSTRVPLVREQVEAFFGKAPLTS 363

Query: 364 VNPDEAVAVGAAVQGGVLAGEV--KDVLLLDVTPLSLGIETMGGVMTKLIEKNTTIPTKA 421
           ++PD  VA+GAA+Q  +L G     ++LLLDV PLSLGIETMGG++ K++ +NTTIP   
Sbjct: 364 IDPDRVVAIGAAIQADILVGNKPESELLLLDVIPLSLGIETMGGLVEKVVSRNTTIPVAR 423

Query: 422 NQVFSTAEDNQSAVTIHVLQGERKQAMYNKSLGQFNLEGINPAPRGMPQIEVIFDLDADG 481
            Q F+T +D Q+A+  HV+QGER+     +SL +F L+GI P   G   I V F +DADG
Sbjct: 424 AQEFTTFKDGQTAMAFHVVQGERELVDDCRSLARFTLKGIPPLAAGAAHIRVTFQVDADG 483

Query: 482 ILHVSAKDKQTGKEQKITIQASGGLSDAEIEKMVQEAEANKEADKKFEELATARNQADQM 541
           +L V+A +K TG +  I ++ S GLSD+EI  M++++  + + D     LA  + +A ++
Sbjct: 484 LLSVTAMEKSTGVQSSIQVKPSFGLSDSEIATMLKDSMKHAKEDIGRRMLAEQQVEAARV 543

Query: 542 IHATRKQITEAGEALPADEKAKIETAINELETAKKGEDKAEIDAKVQAL 590
           + +    +++ G+ L +DE+ +I+T + EL      +D   I   ++ L
Sbjct: 544 LESLNAALSKDGDLLTSDERQQIDTVMAELVQVAGSDDADTIKKAIEIL 592