Pairwise Alignments

Query, 635 a.a., molecular chaperone DnaK from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., chaperone protein HscA (RefSeq) from Shewanella sp. ANA-3

 Score =  401 bits (1031), Expect = e-116
 Identities = 232/591 (39%), Positives = 361/591 (61%), Gaps = 25/591 (4%)

Query: 5   IGIDLGTTNSCVAVLDGDKPRVIENAEGERTTPSVIAYTDGETLVGQPAKRQAVTNPQNT 64
           +GIDLGTTNS VA +       + +  G+ + PS++ YT     VGQ A   +  +P+NT
Sbjct: 22  VGIDLGTTNSLVAAVRSGVTATLPDENGQHSLPSIVRYTQDGIEVGQVAALSSAQDPKNT 81

Query: 65  LFAIKRLIGRRFEDEEVQRDIKIMPYKIVKADNG-DAWVEAKGQKMAAPQVSAEVLKKMK 123
           + ++KR +GR   D  +Q   +  PY+   ++NG   +V  +GQ +   QVSAE+L+ + 
Sbjct: 82  IVSVKRFMGRSLTD--IQSGEQAFPYQFEASENGLPLFVTPQGQ-VNPVQVSAEILRPLV 138

Query: 124 KTAEDFLGEPVTAAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLD-K 182
           + AE  LG  +   VITVPAYF+DAQRQ TKDA  + G++V R++NEPTAAA+AYGLD K
Sbjct: 139 ERAEKTLGGELQGVVITVPAYFDDAQRQGTKDAASLLGVKVLRLLNEPTAAAIAYGLDSK 198

Query: 183 QGGDRTIAVYDLGGGTFDISIIEIDEVEGEKTFEVLSTNGDTHLGGEDFDNRMINYLVDE 242
           Q G   IA+YDLGGGTFDISI+ ++       FEVL+T GD+ LGG+DFD+ +  ++   
Sbjct: 199 QEG--VIAIYDLGGGTFDISILRLNR----GVFEVLATGGDSALGGDDFDHLLQAHM--- 249

Query: 243 FKKDQGIDLRN-DPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTR 301
               Q   L N D    ++L   A + K  L+ A + + +L    AD T  K +   VT+
Sbjct: 250 ---QQVWQLANIDSQLSRQLLIEARRVKEALTDASEVEASLTL--ADGTVLKQL---VTK 301

Query: 302 AKLEALVEDLVQRSLEPLKVALADADLSVNDITDVILVGGQTRMPMVQKKVAEFFGKEPR 361
           A+ + L+  LV++++   +  L DA ++ +++ + ++VGG TR+P+V+++V  FFGK P 
Sbjct: 302 AEFDCLISALVKKTIASCRRTLRDAGVTADEVLETVMVGGSTRVPLVREQVEAFFGKAPL 361

Query: 362 KDVNPDEAVAVGAAVQGGVLAGEV--KDVLLLDVTPLSLGIETMGGVMTKLIEKNTTIPT 419
             ++PD  VA+GAA+Q  +L G     ++LLLDV PLSLGIETMGG++ K++ +NTTIP 
Sbjct: 362 TSIDPDRVVAIGAAIQADILVGNKPESELLLLDVIPLSLGIETMGGLVEKVVSRNTTIPV 421

Query: 420 KANQVFSTAEDNQSAVTIHVLQGERKQAMYNKSLGQFNLEGINPAPRGMPQIEVIFDLDA 479
              Q F+T +D Q+A+  HV+QGER+     +SL +F L+GI P   G   I V F +DA
Sbjct: 422 ARAQEFTTFKDGQTAMAFHVVQGERELVDDCRSLARFTLKGIPPLAAGAAHIRVTFQVDA 481

Query: 480 DGILHVSAKDKQTGKEQKITIQASGGLSDAEIEKMVQEAEANKEADKKFEELATARNQAD 539
           DG+L V+A +K TG +  I ++ S GLSD EI  M++++  + + D     LA  + +A 
Sbjct: 482 DGLLSVTAMEKSTGVQSSIQVKPSFGLSDTEIATMLKDSMKHAKEDISRRMLAEQQVEAA 541

Query: 540 QMIHATRKQITEAGEALPADEKAKIETAINELETAKKGEDKAEIDAKVQAL 590
           +++ +    + + G+ L +DE+ +I+  + +L    +G+D   I   ++ L
Sbjct: 542 RVLESLNAALAKDGDLLTSDERQQIDAVMAQLAEIARGDDADAIKQAIEVL 592