Pairwise Alignments

Query, 200 a.a., nucleotide exchange factor GrpE from Vibrio cholerae E7946 ATCC 55056

Subject, 205 a.a., GrpE protein (RefSeq) from Shewanella loihica PV-4

 Score =  204 bits (519), Expect = 9e-58
 Identities = 108/200 (54%), Positives = 140/200 (70%), Gaps = 4/200 (2%)

Query: 1   MSNEEIKNKDEQLQQDAVETEAEVVGTDADIDWNQAADEIDEKEAKIAQLEAALLVSEER 60
           MS E  K ++ Q++    ETEA  V T+   D     DE+ +   ++ +LE AL  +E +
Sbjct: 1   MSKESNKAQEPQIE----ETEAVAVETEVVEDAASLMDELTQANFRVEELEQALAAAEAK 56

Query: 61  VKEQQDSVLRARAEVENMRRRSEQEVDKARKFALSRFAEELLPVIDNLERAIQAADGEVE 120
           V+EQ+DSV+RA AEVEN+RRR+  +V+KA KFAL +FA ELLPVIDN+ERA+Q    E E
Sbjct: 57  VEEQKDSVIRAAAEVENVRRRAAIDVEKAHKFALEKFANELLPVIDNMERALQGTSSEDE 116

Query: 121 AIKPLLEGVELTHKTFVDTIAKFGLKEINPHGEVFNPEFHQAMSIQESAEHEPNTVMFVM 180
           A K + EGVELT KTF   +AKFGL +++P GE FNP+ HQA+ +Q S E   NTVM VM
Sbjct: 117 ATKAIYEGVELTLKTFTSAVAKFGLTQVDPQGEAFNPDHHQAIGMQPSEEFPANTVMMVM 176

Query: 181 QKGYELNGRVLRPAMVMVSK 200
           QKGY LN R+LRPAMVMVS+
Sbjct: 177 QKGYMLNERLLRPAMVMVSQ 196