Pairwise Alignments

Query, 554 a.a., DNA repair protein RecN from Vibrio cholerae E7946 ATCC 55056

Subject, 581 a.a., DNA repair protein RecN from Synechococcus elongatus PCC 7942

 Score =  271 bits (694), Expect = 4e-77
 Identities = 174/551 (31%), Positives = 290/551 (52%), Gaps = 12/551 (2%)

Query: 1   MLAHLSINNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRAEASMVRQGED 60
           ML  L I NFA++  L+LEL +G+  +TGETGAGKSI +DA+   LGG+     +R G D
Sbjct: 1   MLQSLRIENFALIDQLELELGQGLHVLTGETGAGKSILLDAIDCVLGGKPGGRPIRSGCD 60

Query: 61  KTEVSAAFHLDNNLLASRWLEDN--ELLEGKECILRRIITKDG--RSKAFINGSPVPLSQ 116
           +  + A F L  +L  + WL++   E +E      R ++      RS++ +NG  V   Q
Sbjct: 61  RALLEATFALSPDL--ATWLQEQAIEAIEDSLICSRELVQSSNGLRSRSRVNGVLVNRQQ 118

Query: 117 LKTLGQLLINVHGQHAHQQLMKPEYQLSMLDQYAGH--ADLLKATRHAYQNWRQASNQLK 174
           L  L + L+ +  Q     L +   Q   LD + G   A   +    AY  +R+A+  L+
Sbjct: 119 LAELRRHLVEITAQGQTVALGQTAQQRDWLDSFGGESLAKQRQGVALAYAAYREAAQTLE 178

Query: 175 QLRENSQQNQAQLQLLEYQIKELNELALGE-DEFVELEQEQKRLANSGDLALNCQRAIEL 233
             R++ +    Q  L  +Q++EL +  L + +E  +L QE+ RLA+  +L     R  + 
Sbjct: 179 TRRQSDRDRLRQQDLDRFQLEELTQAELSDPEELTQLSQERDRLAHVAELQQQSYRVYQA 238

Query: 234 LNEGEEV-NALGLLQSVSHTLIDLAEMDSKLTALPSMVAEALIQLEETYHELRNYLDSID 292
           L++ EE  +A   L      L  +   D  L     ++ EA+ Q++E   +L  Y + ++
Sbjct: 239 LDQSEEAGSACDRLGEAEQGLTQMVVFDPSLQPWLQLLQEAIAQVQEVSRQLYRYGEGLE 298

Query: 293 VDPERMAYVEERYSKVMSLARKHHVLPEELYQHHQALLQQIAQLDCSDEKMSALASEVDV 352
            DP+R+A V +R   +  L RK+    ++   + Q L Q++A  +  ++ +    +E+  
Sbjct: 299 SDPDRLAAVGDRIQLLKQLCRKYGPELKDAIAYQQELQQRLADDNDENQSLEYWEAELAQ 358

Query: 353 LYQTFVAAADKLHKSRVRYAKELDKLISQSMHELSMEKAQFKIEVQQDSAHSSPLGFDAV 412
             QT +  +  L   R   A+ L++ +   +  L+ME+ +F++E+Q  S    P G + V
Sbjct: 359 RQQTLIEESACLTALRQATAQTLEQKLIAELAPLAMERVRFQVELQPLS-EPGPTGAEQV 417

Query: 413 TFLVSTNPGQPLQPIAKVASGGELSRMSLAIQVITAQKVDTPSLIFDEVDVGISGPTAAV 472
            F  S NPG+PLQP+++ ASGGE+SR  LA+++  ++     +L+FDE+D G+SG  +  
Sbjct: 418 CFRFSPNPGEPLQPLSETASGGEMSRFLLALKLCFSEADPVGTLVFDEIDAGVSGRVSQA 477

Query: 473 VGKLLRKLGESTQVLCVTHLPQVAGCGHHQLFVAKQTKAGKTETQMLKL-DQEQRIAELA 531
           + + L++LG   QVLCVTH P +A    H   V KQ    +T  ++  L D++QR  ELA
Sbjct: 478 IAEKLQQLGRRHQVLCVTHQPLIAALADHHYRVRKQVSGDRTHVELEALRDRDQRRQELA 537

Query: 532 RLLGGSQITES 542
            L GG+   E+
Sbjct: 538 ELAGGNSAEEA 548