Pairwise Alignments

Query, 554 a.a., DNA repair protein RecN from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., recombination and repair protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  612 bits (1577), Expect = e-179
 Identities = 318/551 (57%), Positives = 403/551 (73%)

Query: 1   MLAHLSINNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRAEASMVRQGED 60
           ML  LSINNFAIV+ L+L+   GMT+ITGETGAGKSIAIDALGLCLG RA+A  VR G  
Sbjct: 1   MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADAGAVRPGAS 60

Query: 61  KTEVSAAFHLDNNLLASRWLEDNELLEGKECILRRIITKDGRSKAFINGSPVPLSQLKTL 120
           KTEVSA F LD+  LA RWLEDN+L    ECILRR IT DGRS+A+ING+PVPLSQLK+L
Sbjct: 61  KTEVSARFSLDDVPLARRWLEDNDLELDDECILRRTITSDGRSRAYINGNPVPLSQLKSL 120

Query: 121 GQLLINVHGQHAHQQLMKPEYQLSMLDQYAGHADLLKATRHAYQNWRQASNQLKQLRENS 180
           GQ L+ +HGQHAH  L+K E+QL++LD YA H  L ++   AYQ  RQ   +L+QL ++ 
Sbjct: 121 GQYLVGIHGQHAHHALLKNEHQLTLLDSYANHRMLQESVASAYQRCRQIEAELRQLEQSQ 180

Query: 181 QQNQAQLQLLEYQIKELNELALGEDEFVELEQEQKRLANSGDLALNCQRAIELLNEGEEV 240
           Q+  A+ QLL+YQ++EL+E AL E EF ++E E KRLAN   L  +CQ  + LL+E +E 
Sbjct: 181 QERIARKQLLQYQVEELDEFALMEGEFEQIEAEHKRLANGTALIEDCQHTLSLLSESDEG 240

Query: 241 NALGLLQSVSHTLIDLAEMDSKLTALPSMVAEALIQLEETYHELRNYLDSIDVDPERMAY 300
           N   LL         L  +D  L  + +M+ +ALIQ++E+  EL  YL ++++DPE  AY
Sbjct: 241 NIESLLNRALSLAATLESLDPTLAPIGNMLNDALIQVQESSSELGRYLSNLELDPEHFAY 300

Query: 301 VEERYSKVMSLARKHHVLPEELYQHHQALLQQIAQLDCSDEKMSALASEVDVLYQTFVAA 360
           +EER SK M+LARKHHV  ++L  HHQ L +++A LD  + ++  L  +V    + +++ 
Sbjct: 301 LEERLSKAMTLARKHHVAADKLAAHHQELARELAGLDSDEAQLDELKQQVQTSREAYLSH 360

Query: 361 ADKLHKSRVRYAKELDKLISQSMHELSMEKAQFKIEVQQDSAHSSPLGFDAVTFLVSTNP 420
           A KL +SR+RYAKELDK ++ S+ EL+M K +F IEV  +    S  G D+V FLV+TNP
Sbjct: 361 AQKLSQSRLRYAKELDKQVTASIQELNMPKGKFTIEVNFNDKVMSANGSDSVEFLVTTNP 420

Query: 421 GQPLQPIAKVASGGELSRMSLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGKLLRKL 480
           GQPL P+AKVASGGELSR+ L IQVITA+KV TP+LIFDEVDVGISGPTAAVVG++LR L
Sbjct: 421 GQPLSPLAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRAL 480

Query: 481 GESTQVLCVTHLPQVAGCGHHQLFVAKQTKAGKTETQMLKLDQEQRIAELARLLGGSQIT 540
           GE+TQV CVTHLPQVAG GH  +FV K TK G+TET M  LD++ RI ELARLLGG  IT
Sbjct: 481 GEATQVFCVTHLPQVAGNGHQHMFVNKSTKGGQTETSMKPLDKDARIQELARLLGGDTIT 540

Query: 541 ESTLANAKELL 551
           E+TLANA+ELL
Sbjct: 541 ENTLANARELL 551