Pairwise Alignments

Query, 554 a.a., DNA repair protein RecN from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., DNA repair protein RecN (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  217 bits (552), Expect = 1e-60
 Identities = 162/541 (29%), Positives = 250/541 (46%), Gaps = 27/541 (4%)

Query: 1   MLAHLSINNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRAEASMVRQGED 60
           ML +L I + A+++ ++LE S G+  +TGETGAGKS  + AL    G R  A MVR G D
Sbjct: 1   MLEYLRIRDLALIEDMELEFSNGLNVLTGETGAGKSFILKALNFLTGDRLGADMVRPGRD 60

Query: 61  KTEVSAAFHLDNNLLASRWLEDNELLEGKECILRR-IITKDGRSKAFINGSPVPLSQLKT 119
           K +V A F                +L   ECI+RR ++   GRS+ FIN +       + 
Sbjct: 61  KAQVEALF----------------MLPDGECIMRRELVAATGRSRLFINDALSSQDAARD 104

Query: 120 LGQLLINVHGQHAHQQLMKPEYQLSMLDQYAGHADLLKATRHAYQNWRQASNQLKQLREN 179
           L   LI    QH   +L++P +Q  +LD Y    DLL+      +  R  + Q + L E 
Sbjct: 105 LRPSLIVHTSQHGQHKLLQPSFQAQLLDTYLQRPDLLERREATLRQLRDVAAQREALLER 164

Query: 180 SQQNQAQLQLLEYQIKELNELALGEDEFVELEQEQKRLANSGDLALNCQRAIELLNEGEE 239
           S+  + +  +LEYQ +E+  +A    E  +LE  +  L ++  L    +  + LL  G +
Sbjct: 165 SRTLEEKRDVLEYQQREIERVAPEHGEEEQLETRRNELRDAASLLEGYEHGMALLRGGAD 224

Query: 240 -VNALGLLQSVSHTLIDLAEMDSKLTALPSMVAEALIQLEETYHELRNYL--DSIDVDPE 296
               + LL  +   L +L+ +D          AEA     +T H+L   L       DP 
Sbjct: 225 GPGMVDLLGQLERQLDELSNLDDAF----GTDAEAARTYRDTLHDLERRLRRRPAIADPG 280

Query: 297 RMAYVEERYSKVMSLARKHHVLPEELYQHHQALLQQIAQLDCSDEKMSALASEVDVLYQT 356
               +E R  ++  L RK     +++      + + ++ LD     +  L  E   L + 
Sbjct: 281 ERERIESRLFELSQLKRKLRRSLDDILNLRDEIDENLSFLDACGLDIKRLEREEASLREQ 340

Query: 357 FVAAADKLHKSRVRYAKELDKLISQSMHELSMEKAQFKIEVQQDSAHSSP-LGFDAVTFL 415
             A  D+L  +R   A+ L + +   +  L   +    ++ +     + P    +    L
Sbjct: 341 LKAVLDELTPARRLAAERLARDLESELAGLGFSE-HVHVDFEFSPTEAWPGCPEEKARLL 399

Query: 416 VSTNPGQPLQPIAKVASGGELSRMSLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGK 475
              NPGQ  QP+ ++ASGGELSR  LA+  + +Q  +T +LIFDEVD G+ G T   V  
Sbjct: 400 WVPNPGQAPQPLDRIASGGELSRFLLAVVGLMSQG-ETATLIFDEVDAGVGGLTLHRVAD 458

Query: 476 LLRKLGESTQVLCVTHLPQVAGCGHHQLFVAKQTKAGKTETQMLKLDQEQRIAELARLLG 535
            L  L    QVLC+TH PQ+A        + K+   G T T   +L+ E    ELAR+ G
Sbjct: 459 RLESLALHRQVLCITHWPQIAARAARHFQIRKEVTDGATSTLCARLEGEAIRDELARMAG 518

Query: 536 G 536
           G
Sbjct: 519 G 519