Pairwise Alignments

Query, 554 a.a., DNA repair protein RecN from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., DNA repair protein from Burkholderia phytofirmans PsJN

 Score =  399 bits (1024), Expect = e-115
 Identities = 228/564 (40%), Positives = 345/564 (61%), Gaps = 19/564 (3%)

Query: 1   MLAHLSINNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRAEASMVRQGED 60
           ML HLSI +F IV +L LE   G T  +GETGAGKSI IDAL L LG RA+A++VR GE 
Sbjct: 1   MLRHLSIRDFVIVAALDLEFDSGFTVFSGETGAGKSILIDALALALGARADANVVRTGES 60

Query: 61  KTEVSAAFHLDNNLLASRWLEDNEL-------LEGKECILRRIITKDGRSKAFINGSPVP 113
           + +++A F  + +    +WL++  L         G   +LRR++  +GRS+AFING+   
Sbjct: 61  RADLTAEF--ETHAQVEQWLDEQALGTTGEDGHHGNTVMLRRVVDANGRSRAFINGTAAT 118

Query: 114 LSQLKTLGQLLINVHGQHAHQQLMKPEYQLSMLDQYAGHADLLKATRHAYQNWRQASNQL 173
           L+QL+ +G++L+++HGQHAHQ LM+P+ Q  + D +AG +D   +   A++ WR+    +
Sbjct: 119 LAQLREVGEMLVDIHGQHAHQLLMRPDAQRELFDTHAGLSDTAASVTRAWRAWREKVQAV 178

Query: 174 KQLRENSQQNQAQLQLLEYQIKELNELALGEDEFVELEQEQKRLANSGDLALNCQRAIEL 233
           +  +   ++ Q + + L +Q+ EL++LA    E+ E+  E +RL++S +L    Q A+  
Sbjct: 179 EHAQTRDRELQLERERLAWQLTELDKLAPQPGEWEEVNAEHRRLSHSANLIDGVQGALGA 238

Query: 234 LNEGEEVNALGLLQSVSHTLIDLAEMDSKLTALPSMVAEALIQLEETYHELRNYLDSIDV 293
           L+E +E   +  L S+   + DLAE+D  L  + + +  A IQL+E  + L +Y   +++
Sbjct: 239 LSESDEA-MITHLSSIVSKVRDLAEIDPALNDVLAALEPAEIQLQEAAYSLSHYAQKLEL 297

Query: 294 DPERMAYVEERYSKVMSLARKHHVLPEELYQHHQALLQQIAQLDCSDEKMSALASEVDVL 353
           DP+R+A VE+R   + S ARK  + P+ L + H+A   Q+A LD + +  S  A+E    
Sbjct: 298 DPDRLAQVEKRLDALHSAARKFRLQPQTLPEEHEARRAQLAALDAAADLDSLHAAEAKAK 357

Query: 354 YQTFVAAADKLHKSRVRYAKELDKLISQSMHELSMEKAQFKIEV---QQDSAHSSPLGFD 410
            + F+  A KL K+R +  K L   ++  M ELSM+   F++ +    +  AH    G +
Sbjct: 358 -EAFLTEAKKLSKARAKAGKALGAAVTTGMQELSMKGGSFEVALVPLPEGGAH----GLE 412

Query: 411 AVTFLVSTNPGQPLQPIAKVASGGELSRMSLAIQVITAQKVDTPSLIFDEVDVGISGPTA 470
            V F V+ + G PL+P+AKVASGGEL+R+SLA+ VI +    TP+LIFDEVD GI G  A
Sbjct: 413 QVEFRVAGHAGVPLRPLAKVASGGELARISLALAVIASAASPTPTLIFDEVDTGIGGGVA 472

Query: 471 AVVGKLLRKLGESTQVLCVTHLPQVAGCGHHQLFVAKQTKA-GKTETQMLKLDQEQRIAE 529
            VVG+LL +LG+  QVLCVTHLPQVA  G H   VAK     G T + +  LD+  R+ E
Sbjct: 473 EVVGRLLHQLGQQRQVLCVTHLPQVAARGDHHFQVAKAGNGKGGTVSSVTSLDKASRVEE 532

Query: 530 LARLLGGSQITESTLANAKELLIA 553
           +AR+LGG +IT +T  +AKE+L A
Sbjct: 533 VARMLGGLEITPTTRKHAKEMLAA 556