Pairwise Alignments

Query, 554 a.a., DNA repair protein RecN from Vibrio cholerae E7946 ATCC 55056

Subject, 552 a.a., recombination and repair protein (RefSeq) from Shewanella sp. ANA-3

 Score =  613 bits (1581), Expect = e-180
 Identities = 321/551 (58%), Positives = 404/551 (73%)

Query: 1   MLAHLSINNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRAEASMVRQGED 60
           ML  LSINNFAIV+ L+L+   GMT+ITGETGAGKSIAIDALGLCLG RA+AS VR G  
Sbjct: 1   MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADASSVRPGAS 60

Query: 61  KTEVSAAFHLDNNLLASRWLEDNELLEGKECILRRIITKDGRSKAFINGSPVPLSQLKTL 120
           KTEVSA F L++  LA RWLEDN+L    ECILRR I  DGRS+A+ING+PVPL+QLK L
Sbjct: 61  KTEVSARFSLEDVPLAKRWLEDNDLELDDECILRRTIGSDGRSRAYINGNPVPLTQLKLL 120

Query: 121 GQLLINVHGQHAHQQLMKPEYQLSMLDQYAGHADLLKATRHAYQNWRQASNQLKQLRENS 180
           GQLL+ +HGQHAH  ++K E+QL++LD YA H  L+     +YQ  +Q   +LKQL  + 
Sbjct: 121 GQLLVGIHGQHAHHAMLKSEHQLTLLDSYANHRLLIDTVAASYQRCKQIEAELKQLEASQ 180

Query: 181 QQNQAQLQLLEYQIKELNELALGEDEFVELEQEQKRLANSGDLALNCQRAIELLNEGEEV 240
           Q+  A+ QL++YQ++EL+E  L   EF E+EQE KRLAN  +L  +CQ ++ LL +GEE 
Sbjct: 181 QERIARKQLVQYQVEELDEFDLKVGEFEEIEQEHKRLANGTELVDSCQASLFLLTDGEES 240

Query: 241 NALGLLQSVSHTLIDLAEMDSKLTALPSMVAEALIQLEETYHELRNYLDSIDVDPERMAY 300
           N   LL        +L   D  LT + +M+ EALIQ++E+  EL++YL  +++DP   AY
Sbjct: 241 NIESLLNKAVGLAENLQSYDPALTNVSTMLNEALIQVQESAGELQHYLSKLELDPAHFAY 300

Query: 301 VEERYSKVMSLARKHHVLPEELYQHHQALLQQIAQLDCSDEKMSALASEVDVLYQTFVAA 360
           +EER SK M LARKHHV P++L +HH AL  ++  LD  + K+  +  +V+     ++A 
Sbjct: 301 LEERLSKAMQLARKHHVSPDKLAEHHLALKSELTTLDDDENKLEDIQRQVEASKVAYLAN 360

Query: 361 ADKLHKSRVRYAKELDKLISQSMHELSMEKAQFKIEVQQDSAHSSPLGFDAVTFLVSTNP 420
           A KL +SR RYAKELDKL++QS+HEL+M K +F IEV  +    S  G D + F+V+TNP
Sbjct: 361 AQKLSQSRARYAKELDKLVTQSIHELNMPKGKFTIEVNFNPEIISMNGSDNIEFMVTTNP 420

Query: 421 GQPLQPIAKVASGGELSRMSLAIQVITAQKVDTPSLIFDEVDVGISGPTAAVVGKLLRKL 480
           GQPLQPI++VASGGELSR+ L IQVITA+KV TP+LIFDEVDVGISGPTAAVVG++LR L
Sbjct: 421 GQPLQPISRVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGRMLRSL 480

Query: 481 GESTQVLCVTHLPQVAGCGHHQLFVAKQTKAGKTETQMLKLDQEQRIAELARLLGGSQIT 540
           GESTQVLCVTHLPQVAG GH  +FV K  KAG TET M  LD+EQRI ELARLLGG  IT
Sbjct: 481 GESTQVLCVTHLPQVAGNGHQHMFVNKFNKAGSTETTMTPLDREQRIQELARLLGGDTIT 540

Query: 541 ESTLANAKELL 551
            +TLANA+ELL
Sbjct: 541 TNTLANARELL 551